Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0294 ATGTTGGAAAACTCGAACTCATCGGAAAATACCCCAGCTCCGGTCCAGGACCACCCCGTGGAGGACGGAGGTGGCAGCGGGCCTGACTCCGATGGCCTCCAAGGCCAACGGGGGCTCGCCGACCAGGAAGTTGACCGGAATTCCGCCGGTCACCGCTGGCCTCGGGAAGAGACATTGGCTTTACTCAAAATAAGGTCTGAGATGGACATTGCTTTCAGGGATATCAACCCCAAAGGTCCTCTCTGGCAACAGGTTTCGAGGAGATTGGCTGAGCTAGGATACAATAGGAGTGCAAAAAAATGTAAGGAGAAGTTCGAAAACATTTACAAGTACCATAGAAGGACCAAGGAAGGCCGTTATGGCCGACCTAACGGAAAGACTTATCGTTTCTTTGAGCAACTAGAAGCTCTTGACGCCAACCTCCTCCTTCCACGACCTCCAGCTTCAGCCGAAAAGGATCACACACCAACCTCACTTGATGTTGTTCATCATGCCATTCCCTGCTCTGCTCGATTCCCTTGTGGTGCAAATAGTGATTCTCTTACTTCTTCTTCCAATGAAGAAATACCCAAAAAGAAGAGTAAGCTGACTAGGTTTTTCCAGGGCTTGATGAAGCAAGTAATAGAGAAACAAGAGGCCCTACAGAAGAATTTTATGGAGGTGTTGGAAAAATGTGAGCAAGATCGAATAGCGAGGGAGGAAGCATGGAGGACTCAGGAATTAGCTCGGCTTAACAAGGAGCGTGAGCTTTTGGCTCAAGAAAGATCAGCCGCTGAAGCTAAAGATGCTGCGTTGATTGCCTTTCTGAAGAAGATGACAGAACAACCACCATGCCCGGTGCAGCTGCCGGAGAATGTTCCGGTTGACCGGAACATTATTTCAGATGATTTAGATAAGAACAATCAAGAAAAAGTCAATGGAGGTTGTACCGTTAGCGTTACGGATAAGCAAGAATGTGGAAATAATGTTGGGAATTTTATACAGATGAGTTCATCCCGTTGGCCTAAAGAAGAAGTGGAAGCTCTGATTGGATTGAGGACAAACATGGATGCAGAATATGAAGGAGGAAATAATGGGATTAAGGGACCTCTGTGGGAAGAAATATCTTCGGCAATGAAAAGGATTGGTTACGATCGCAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTTAAGAGGATGAAGCAGAAAAACAAGCGAAAGCCTGAGGATTCAAAGACATGCCCATATTTTCACCAGCTAGATGAACTATACAGTAAGAAACCCAGGAAGGTACAAGAATCAGGTGCTTCTGGGAACGAGCTGAAGGCGGAGGAGCTATTAATGCATATAATGAGCGGTCAAGAAGAGCGACAATCATCTGAAGATACCGGCAGAGAGAAGACGAACCAGATTGAAGGAGATAAGGAAGATGTGGATCAGACGGTAGACAAGAGTAATTCAACAGCAATCATGGGTTGA 1473 0.461 MLENSNSSENTPAPVQDHPVEDGGGSGPDSDGLQGQRGLADQEVDRNSAGHRWPREETLALLKIRSEMDIAFRDINPKGPLWQQVSRRLAELGYNRSAKKCKEKFENIYKYHRRTKEGRYGRPNGKTYRFFEQLEALDANLLLPRPPASAEKDHTPTSLDVVHHAIPCSARFPCGANSDSLTSSSNEEIPKKKSKLTRFFQGLMKQVIEKQEALQKNFMEVLEKCEQDRIAREEAWRTQELARLNKERELLAQERSAAEAKDAALIAFLKKMTEQPPCPVQLPENVPVDRNIISDDLDKNNQEKVNGGCTVSVTDKQECGNNVGNFIQMSSSRWPKEEVEALIGLRTNMDAEYEGGNNGIKGPLWEEISSAMKRIGYDRSAKRCKEKWENINKYFKRMKQKNKRKPEDSKTCPYFHQLDELYSKKPRKVQESGASGNELKAEELLMHIMSGQEERQSSEDTGREKTNQIEGDKEDVDQTVDKSNSTAIMG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0294 490 MobiDBLite consensus disorder prediction 1 52 - -
Acco13g0294 490 ProSiteProfiles Myb-like domain profile. 52 109 IPR001005 -
Acco13g0294 490 CDD GT1 332 399 - -
Acco13g0294 490 FunFam Trihelix transcription factor GT-2 53 114 - -
Acco13g0294 490 CDD GT1 52 116 - -
Acco13g0294 490 Gene3D - 334 397 - -
Acco13g0294 490 Gene3D - 53 114 - -
Acco13g0294 490 Pfam Myb/SANT-like DNA-binding domain 51 137 IPR044822 -
Acco13g0294 490 Pfam Myb/SANT-like DNA-binding domain 332 421 IPR044822 -
Acco13g0294 490 ProSiteProfiles Myb-like domain profile. 332 392 IPR001005 -
Acco13g0294 490 SMART sant 49 111 IPR001005 -
Acco13g0294 490 SMART sant 330 394 IPR001005 -
Acco13g0294 490 FunFam Trihelix transcription factor GT-2 334 397 - -
Acco13g0294 490 MobiDBLite consensus disorder prediction 448 480 - -
Acco13g0294 490 PANTHER FI21293P1 10 474 - -
Acco13g0294 490 MobiDBLite consensus disorder prediction 448 490 - -
Acco13g0294 490 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0294 Acco-ChrAcco13 2049114 2050898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0294 191 425 Trihelix Transcription Factor Family AT1G76890 51.695 3.54e-70 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco13g0294 Myb_DNA-bind_4 7.4e-21 CL0123