Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0287 ATGGACTTGGACGATTTCCGATCCATTTTGGAGACTGCGGGCGTTGACGTCTGGACTTTCATCGGCACCGCTATTACAGTCGCTTCCTTGGATTACGGCAATGACTTGAAGTATCGCCGGGATGGAATCGTTGAGCGCCTCTATGCGGCTACTTCCGCTCCTGCGTCCTGTCGGAATTGCGAGCCCAATCACCTCAGGTCTAACGGCTGCGGAATCGGCGTTCCAATCAAGGAGCGCAGCAGTCCTCTGCCCAACAAAAGTCGTGCGTCGCCTGCAACGCCGCAGTCCTTGGGTAAAGACGACAACGAAGACGACGAGGAGATAGATCCTTACGGAGGTTTGTTCGATGATGAGCAGAAGAAGATTCTGGAGACTAAAGAGCTACTTGAAGACCCTAACCAGTCTGAGGAATCATTGGTGGACTTGCTGCAAAGTCTTGCAGACATGGATATCACATTCCAAGCGCTGAAGGACACTGACATTGGGAGGCACGTGAATCGTTTGCGAAAGCACTCGTCCAATGATGTTCGGAGATTGGTGAAGCTCCTTGTCAGGAAATGGAAAGACATTGTGGATGAATGGGTGAAGTTGAATCCACCAGCTGGGCACGCCTCGCTCATGGCTGATGGGGACTCGCCTCCGCCCAGAACCACCGCCCAGAACGGCTATCATCAGATTCCTGATTTTGCTTATTCGCCAAATCCACATAATGGTAGTTCTGGGTCGGACCGGAACAATTCAGAGGCTGAATTAAAACCAAAACCTATTCCCCGGAAAGAAGCTCCCCCAAAACCAGCGCCCTCTGCCTTCATATCTACTTCTGCTCCGCCTCAAAACAGACGGGGAGAACAGAGGGAAAGCAATTTTGACGCGGAGAGACTTGCTTCGGCAAGAAGGCGGCTTCAAGAGAACTACAAGGAAGCCGAAAATGCCAAAAAGCAAAGAACCATTCAGGTGATGGACATCCACGAGATACCGAAACCAAAAGCCAAGAACGCCTTCTTTGCCAAGAACAAAGGCGGCGGCGGCGGCGGTTCTCAGGGAAGGCACTGGTGA 1056 0.5199 MDLDDFRSILETAGVDVWTFIGTAITVASLDYGNDLKYRRDGIVERLYAATSAPASCRNCEPNHLRSNGCGIGVPIKERSSPLPNKSRASPATPQSLGKDDNEDDEEIDPYGGLFDDEQKKILETKELLEDPNQSEESLVDLLQSLADMDITFQALKDTDIGRHVNRLRKHSSNDVRRLVKLLVRKWKDIVDEWVKLNPPAGHASLMADGDSPPPRTTAQNGYHQIPDFAYSPNPHNGSSGSDRNNSEAELKPKPIPRKEAPPKPAPSAFISTSAPPQNRRGEQRESNFDAERLASARRRLQENYKEAENAKKQRTIQVMDIHEIPKPKAKNAFFAKNKGGGGGGSQGRHW 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0287 351 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 116 201 IPR035441 -
Acco13g0287 351 MobiDBLite consensus disorder prediction 200 297 - -
Acco13g0287 351 SMART TFS2_5 122 193 IPR003617 GO:0005634
Acco13g0287 351 CDD TFIIS_I 120 192 - -
Acco13g0287 351 MobiDBLite consensus disorder prediction 214 246 - -
Acco13g0287 351 Coils Coil 291 318 - -
Acco13g0287 351 MobiDBLite consensus disorder prediction 328 351 - -
Acco13g0287 351 Pfam TFIIS helical bundle-like domain 142 191 IPR017923 -
Acco13g0287 351 MobiDBLite consensus disorder prediction 83 97 - -
Acco13g0287 351 ProSiteProfiles TFIIS N-terminal domain profile. 117 194 IPR017923 -
Acco13g0287 351 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 351 IPR044790 -
Acco13g0287 351 MobiDBLite consensus disorder prediction 72 113 - -
Acco13g0287 351 MobiDBLite consensus disorder prediction 283 297 - -
Acco13g0287 351 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 120 201 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0287 Acco-ChrAcco13 2004601 2006649 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco13g0287 Med26 1.4e-11 No_clan