Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0272 ATGAAACCCCTCTCCCCCACAAACTATCATCGTTCTTTCTTCCTCTTATTCTCGTTAACTCTTCTCTCCCTCCAGCCTCCTCCCTCATCCTCTGCTTCTTCTTCTTCAGCTTTCATAGACCAAACTCACCAGCTTCTCACCTTCAAGAATTCCCTCCCTGACCCCTCCGTACTCCATAACTGGCTCCCCAATCACAATCCCTGTTCATTCATTTCGGTTTCTTGCCGGGATACCCTTGTTTCTTCCATAGACCTCAGCTTTGTCCCCTTGAACACTAATTTCAGCCTTGTCTCTACCCATCTTCTCACCCTCGACCACCTTCAAGTTCTTAATCTGCCAGGCACCAATCTTTCTGGCACCATTTCTTTCTCGGCTGGCTTCAGGTGTAGCAGCTCATTGAGCTCCTTAGATCTGTCTCAGAACACTTTGTCTGGTTCCCTTTCGTCCTTGAACTATTTGTCCTCTTGTTCGGCCCTAAAGTCTCTCAATCTTTCAGGTAATCTCCTAGAATTTTCAGGGAGAGATTCAGCCGGATTGAGCCTCAGTCTCCAGGTCCTCGATCTCTCTTGCAACAATAAGATTTCGGGTCCCAACGTTCTGCCATGGATCTTATCACAGGGCTGCGACGGCTTGAAGCTCTTGTCTCTAAAGGGTAACAGAATCACAGGGGAAATGAACTTTTCCACTTGCCAAGCTTTGCAGCACTTGGACCTTTCCTCCAATAACTTGTCTCTCGCTGTTCCTTCTTTTGGTGAGTGTCTCGCTTTAGAGTACCTCGACATCTCTGCTAATAAGTTTTACGGTGACATTGGTGGCGCCATCTCCAGTTGCAAGCTGCTCAGCTACTTGAACATCTCGTCCAACGAGTTCTTCGGTCCGGTTCCCTCACTTCCGTCCGGTTCTCTACAGTTCTTATATCTTGCCAACAACCATTTCCAGGGACAGATTCCTGCTAGCCTTTCTGACTTGTGCCCTACCCTGGTAGTACTCGATCTTTCCTTAAACAACCTTTCCGGTGTGCTTCCAAGCGATTTCAGGGCTTGTTCTTCATTGGAATCTTTTGATATATCCCACAACAAGTTCACCGGCGAGCTTCCGGTTGATTTTTTCGCAGAATTGATTGCCTTGAAGAGGCTAGTTCTTTCCTTTAATGATTTCACGGGTACACTTCCTCATACCCTGTCTCAGTTCTCGAAGTTGGAGTCATTGGATCTGAGCTCTAATAACCTCACTGGCTCAATTCCTGGAGGGCTGTGTGGAGATCCGAGGAATAATTTGAAAGAATTATACCTGCCGAATAATCTGTTGACGGGTTCTATTCCACCCACACTCAGCAACTGTTCTCAGCTTGTGACTTTGGATTTGAGTTTCAACTACCTGACGGGGACTATCCCTTCCAGCTTTGGGTCCCTTTCAAAACTCAAAGATTTGGTTCTTTGGCTGAACCAGCTACATGGAGAAATACCCCAAGAGCTTGAGCACATTAAGACTCTAGAGAATTTGATTCTGGACTTCAATGAGCTGTCTGGGACCATCCCTTCTGGCTTAAGCAACTGCACCGGCATGAATTGGTTATCCTTGTCTAATAACAGGTTGAGTGGGGAGATTCCGGCATGGATTGGTCAGCTTTCAAATCTTGCGATCTTGAAATTGAGTAATAACTCCTTCTCTGGGAGGATTCCGCCGGAGCTTGGGGATTGTCAAAGATTGATATGGTTGGATCTGAATACTAATTATCTGAATGGATCAATTCCTACTGAGTTATTTAAGCAGTCGGGCAAAATTGAAGTTAATTTCATCAGTCGAAAGACATATGTGTACATCAAGACTGACGGTAGTAAGCAGTGCCATGGAGCGGGAAATTTGCTAGAGTTTGCTGGTATTAAAATGGAGCAGATGAGCAGAATTTCATCCAGGAGCCCTTGCAATTTCACTAGCTTCACTAGAGTTTATAATGGTAAGGTCCGTCCCAAGTTTAGTAGTGGTTCTATGATTTTTCTGGACATTTCACATAATATGTTGTCGGGTACTCTTCCCAAGGAGATGGGGAGTATGAATACTTTGTTTATTTTGAACTTGGGATACAACGATATATCTGGGAGAATCCCACCGGAATTTGGGGACATGAAAAATCTCAACATTCTTGATCTCTCCAACAATAGGCTTGAAGGACAGATTCCTCAAACCTTGACAGGCATTTCCATGCTCACGGAAATGGATTTGTCAAACAACAATCTCTCAGGATTGATTCCTGAATCTGGTCAATTTGATACCTTTCCTGCTGCCAAATTTGCAAATAATTCTGATCTCTGTGGTGTCCCTCTTGTTATTCCATGCGGATCAGGCTTGAGATCAGGTGCAAATGCCCGGCATCAGAGGTCTAACCAGAGACGGGCATCTCTGGCAAGGAGTGTGTCCATTGGTTTACTGTTTGCTCTTTTTTGCATCCTTGGTCTCCTTATAATCGCCTTCGAGGCAAGAAAGAGGAGGAAGAAGAAGGAGGCTACTTTGGATATCTACATCGACAGCCGATCTCAGTCAGGTACAGCTAATGTCGGTTGGAAGGTGAGTGCCCGTGAAGCTCTTAGCATAAATCTTGCTACTTTTGAGAAGCCCCTTCGGAAGCTTACTTTTGGGGATCTTCTTGAAGCCACAAATGGTTTCCACAATGACAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATACAAGGCTCAGTTGAAAGATGGAAGTGTAGTGGCGATTAAGAAACTGATTCATATCAGCGGACAAGGGGACAGGGAGTTCACTGCTGAAATGGAAACAATAGGGAAAATTAAGCATCGGAACCTTGTTCCCCTTCTTGGATACTGCAAAGTTGGAGAAGAAAGACTCCTGGTTTATGAATACATGAAATATGGAAGCCTAGAGGATGTTTTGCATGATCCAAAGAAATCCGGGATTAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAATCGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAATTGCATTCCTCATATCATTCATAGAGACATGAAATCAAGCAATGTGCTGCTTGATGGGAATCTGGAAGCCAGAGTCTCCGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACCCATTTAAGTGTCAGCACACTAGCAGGAACCCCTGGTTATGTTCCTCCCGAATACTACCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTACTGACAGGGAAACGGCCCACAGATTCATCAGACTTTGGTGATAACAATCTCGTGGGATGGTTTAAGCAGCATGCTAAAATAAAAATAAGTGATGTTTTTGACTCAGAGCTCATGAAAGAGGATCCGAGTCTTGAGATTGAGCTTTTACAACACTTAAGAGTTGCTTATGCTTGTCTTGATGATCGACCTCTGAGGCGTCCCACAATGATTCAAGTGATGGCAATGTTTAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCTACCATCACGAGTGAGGATGGCGGTTTCGGCGCCATGGAAATGGTAGATATGAGCATACAAGAAATCCCAGAATTAAGCAGCAAGCAGTAG 3609 0.4478 MKPLSPTNYHRSFFLLFSLTLLSLQPPPSSSASSSSAFIDQTHQLLTFKNSLPDPSVLHNWLPNHNPCSFISVSCRDTLVSSIDLSFVPLNTNFSLVSTHLLTLDHLQVLNLPGTNLSGTISFSAGFRCSSSLSSLDLSQNTLSGSLSSLNYLSSCSALKSLNLSGNLLEFSGRDSAGLSLSLQVLDLSCNNKISGPNVLPWILSQGCDGLKLLSLKGNRITGEMNFSTCQALQHLDLSSNNLSLAVPSFGECLALEYLDISANKFYGDIGGAISSCKLLSYLNISSNEFFGPVPSLPSGSLQFLYLANNHFQGQIPASLSDLCPTLVVLDLSLNNLSGVLPSDFRACSSLESFDISHNKFTGELPVDFFAELIALKRLVLSFNDFTGTLPHTLSQFSKLESLDLSSNNLTGSIPGGLCGDPRNNLKELYLPNNLLTGSIPPTLSNCSQLVTLDLSFNYLTGTIPSSFGSLSKLKDLVLWLNQLHGEIPQELEHIKTLENLILDFNELSGTIPSGLSNCTGMNWLSLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCQRLIWLDLNTNYLNGSIPTELFKQSGKIEVNFISRKTYVYIKTDGSKQCHGAGNLLEFAGIKMEQMSRISSRSPCNFTSFTRVYNGKVRPKFSSGSMIFLDISHNMLSGTLPKEMGSMNTLFILNLGYNDISGRIPPEFGDMKNLNILDLSNNRLEGQIPQTLTGISMLTEMDLSNNNLSGLIPESGQFDTFPAAKFANNSDLCGVPLVIPCGSGLRSGANARHQRSNQRRASLARSVSIGLLFALFCILGLLIIAFEARKRRKKKEATLDIYIDSRSQSGTANVGWKVSAREALSINLATFEKPLRKLTFGDLLEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKSGIKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWFKQHAKIKISDVFDSELMKEDPSLEIELLQHLRVAYACLDDRPLRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEMVDMSIQEIPELSSKQ 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0272 1202 ProSitePatterns Protein kinases ATP-binding region signature. 894 917 IPR017441 GO:0005524
Acco13g0272 1202 Pfam Leucine Rich Repeat 399 419 IPR001611 GO:0005515
Acco13g0272 1202 Pfam Leucine Rich Repeat 425 447 IPR001611 GO:0005515
Acco13g0272 1202 SMART LRR_typ_2 324 347 IPR003591 -
Acco13g0272 1202 SMART LRR_typ_2 543 567 IPR003591 -
Acco13g0272 1202 SMART LRR_typ_2 373 396 IPR003591 -
Acco13g0272 1202 SMART LRR_typ_2 397 421 IPR003591 -
Acco13g0272 1202 SMART LRR_typ_2 709 732 IPR003591 -
Acco13g0272 1202 SMART LRR_typ_2 230 253 IPR003591 -
Acco13g0272 1202 SMART LRR_typ_2 733 756 IPR003591 -
Acco13g0272 1202 Gene3D Ribonuclease Inhibitor 45 776 IPR032675 -
Acco13g0272 1202 SMART serkin_6 888 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0272 1202 Gene3D Transferase(Phosphotransferase) domain 1 964 1165 - -
Acco13g0272 1202 ProSiteProfiles Protein kinase domain profile. 888 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0272 1202 SUPERFAMILY L domain-like 57 366 - -
Acco13g0272 1202 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Acco13g0272 1202 Pfam Leucine rich repeat 706 746 IPR001611 GO:0005515
Acco13g0272 1202 Pfam Leucine rich repeat 449 508 IPR001611 GO:0005515
Acco13g0272 1202 Pfam Leucine rich repeat 301 361 IPR001611 GO:0005515
Acco13g0272 1202 FunFam serine/threonine-protein kinase BRI1-like 2 850 963 - -
Acco13g0272 1202 SUPERFAMILY L domain-like 663 775 - -
Acco13g0272 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1010 1022 IPR008271 GO:0004672|GO:0006468
Acco13g0272 1202 Gene3D - 598 660 - -
Acco13g0272 1202 Pfam Protein kinase domain 888 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0272 1202 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 207 422 - -
Acco13g0272 1202 FunFam Brassinosteroid LRR receptor kinase 964 1165 - -
Acco13g0272 1202 Gene3D Phosphorylase Kinase; domain 1 849 963 - -
Acco13g0272 1202 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Acco13g0272 1202 Pfam Brassinosteroid receptor island domain 593 660 IPR045381 -
Acco13g0272 1202 FunFam Leucine-rich repeat receptor protein kinase EMS1 513 602 - -
Acco13g0272 1202 CDD STKc_IRAK 894 1163 - -
Acco13g0272 1202 PANTHER OS04G0122200 PROTEIN 93 296 - -
Acco13g0272 1202 SUPERFAMILY RNI-like 273 590 - -
Acco13g0272 1202 SUPERFAMILY Protein kinase-like (PK-like) 874 1165 IPR011009 -
Acco13g0272 1202 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 661 779 - -
Acco13g0272 1202 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 423 512 - -
Acco13g0272 1202 PRINTS Leucine-rich repeat signature 709 722 - -
Acco13g0272 1202 PRINTS Leucine-rich repeat signature 400 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0272 Acco-ChrAcco13 1878615 1882223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0272 12 1197 Receptor kinase-like Gene Family AT4G39400 67.140 0.0 1526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco13g0272 Pkinase 6.3e-45 CL0016