Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0257 ATGTCAGGGAAGAGAAATAACCATACCAGTCCTGCTGGAAGCCCAACTTCTGGGAACATCTCAGACAGCTCTTCCAAAGAACAAGACAGGTTCCTTCCCATTGCCAACGTTAGCCGTATCATGAAAAGGGCTCTTCCAGCTAATGCCAAAATCTCCAAGGAAGCCAAAGAGACAGTTCAAGAATGTGTCTCTGAATTCATAAGCTTCATCACCGGTGAAGCATCTGATAAGTGCCAGAGAGAAAAGAGGAAGACAATCAACGGCGACGATCTTCTGTGGGCCATGACAACGTTGGGGTTCGAGAATTATGTTGGACCCTTGAAGGTTTACCTCAGTAACTACAGGGAAACAGAGGGAGACAAGAGTTGTGTTGGTACTAAACAAGAAGATCAAGCTAAGGCAGAAACTAATGATGGGGTCTCTGAAATCAATAGGCTGACTAATTCTGTCTCAGCAAAAGAAGATCTTGCTGGTTTCAACGGTGCGCTTTACTCTGTTATGTCTCAGGTTGCTCCAAAGAGCTTCGCAGAGATAGGAGGGTTCACTGGTTTCAGAGAAAACCCCATGAACATGGCTATTGCTCAGAGTGCAGTTCATAATGATGCTGATGGAAACCTGGGTTACAGGGTTGAGTGGTAG 639 0.4554 MSGKRNNHTSPAGSPTSGNISDSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLSNYRETEGDKSCVGTKQEDQAKAETNDGVSEINRLTNSVSAKEDLAGFNGALYSVMSQVAPKSFAEIGGFTGFRENPMNMAIAQSAVHNDADGNLGYRVEW 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0257 212 Gene3D Histone, subunit A 18 155 IPR009072 GO:0046982
Acco13g0257 212 SUPERFAMILY Histone-fold 28 137 IPR009072 GO:0046982
Acco13g0257 212 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 142 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco13g0257 212 FunFam Nuclear transcription factor Y subunit B-3 20 144 - -
Acco13g0257 212 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Acco13g0257 212 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Acco13g0257 212 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Acco13g0257 212 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Acco13g0257 212 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Acco13g0257 212 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0257 Acco-ChrAcco13 1788729 1789367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0257 22 131 CCAAT-HAP3 Transcription Factor Family AT4G14540 81.818 2.26e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco13g0257 CBFD_NFYB_HMF 1.1e-26 CL0012