Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0247 ATGAATTCAACATCCACACAGTTTGTTTCCTCAAGAAGGATGGGTTTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGTAATTGTGATTTAAGTGCTTCTGTGCCCTTAATTGGTGAGGCAGATATCAAGTTAGATAATCAGTCAGAGGATTCTTCTCAAGGAATGCTCGGAATTCCAAAGAATTATGATCAAGAAGCTAATAGGTCTACTGAAAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCTTATGTTCAGCAATTAGAATCAAGCCGTTTGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGTGCAAGGCAGCAGGAAACAAAACTGCAGGGATCATTTTTAGGTTGTGGACTTGATTCTGATAATTTGGTATTTGCTGGATCTGTAAATTCAGGCATAGCAACCTTTGAGATGGAGTATGGGCAGTGGGTAGAAAAACAAGACAGGCAAATTTGTGAGCTGAGAAATGCTTTAAACGCTCATACCAGTGACATAGAGCTCAGAATACTTGTAGATGGTATAATGAATCACTATTCAAACCTTTTCCGCATGAAATCCGCAGCTGCAAAAGTGGATGTTTTCTATGTCTTGTTTGGTATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCCGAGCTTCTCAAGGTTCTTGCCCCTTTGATTGAACCTTTGACAGAACAACAACGAAGGGATGTTTACAACCTCGGACAATCATGCCAGCAAGCAGAAGATGCCCTTTCACAAGGCAGGGACAGACTTCAGCAAATACTTGTTGAAACTGTTGTCGCCGGACAACTGGTCGACGGAACTTACATTCCTCAGATGAATATCGCAGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAATCAGGCCGATCATCTTCGGCAAGAAACATTGCAACAAATGTTTAGAATCCTTACAATTCGTCAGACAGCTTGGTGCTTGCTTGCCTTAGGGGAATACTTCCAACGTTTGAGAGCTTTGAGCTCCCTTTGGGCTAATCGTCCTTCTGAACCACCTGCTTAA 1107 0.4264 MNSTSTQFVSSRRMGLYDPIHQISMWEENFKSNCDLSASVPLIGEADIKLDNQSEDSSQGMLGIPKNYDQEANRSTEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQETKLQGSFLGCGLDSDNLVFAGSVNSGIATFEMEYGQWVEKQDRQICELRNALNAHTSDIELRILVDGIMNHYSNLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLAPLIEPLTEQQRRDVYNLGQSCQQAEDALSQGRDRLQQILVETVVAGQLVDGTYIPQMNIAVEKLEALVSFVNQADHLRQETLQQMFRILTIRQTAWCLLALGEYFQRLRALSSLWANRPSEPPA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0247 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Acco13g0247 368 Gene3D - 76 132 - -
Acco13g0247 368 SUPERFAMILY Leucine zipper domain 78 119 IPR046347 GO:0003700|GO:0006355
Acco13g0247 368 SMART brlzneu 74 143 IPR004827 GO:0003700|GO:0006355
Acco13g0247 368 FunFam BZIP family transcription factor 77 126 - -
Acco13g0247 368 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
Acco13g0247 368 Pfam Seed dormancy control 169 244 IPR025422 GO:0006351|GO:0043565
Acco13g0247 368 ProSiteProfiles DOG1 domain profile. 152 362 IPR025422 GO:0006351|GO:0043565
Acco13g0247 368 PANTHER TRANSCRIPTION FACTOR TGA9 1 365 - -
Acco13g0247 368 Coils Coil 97 131 - -
Acco13g0247 368 Pfam bZIP transcription factor 78 113 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0247 Acco-ChrAcco13 1718728 1720867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0247 1 366 Calmodulin-binding Proteins AT5G10030 67.120 3.32e-177 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco13g0247 DOG1 3.2e-31 No_clan