Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0245 ATGGCGGATCACTCAGATACTTCACCGCTGGTCTCTCCACCATCGATCACTGACCCTAACGAGATCGACCTTGAGGCCGGTCCGAGCGAACAAATTCAATGCCGAATCTGCCTCGAAACTGATGGTAGAGATTTCATAGCTCCTTGCAAATGCAAAGGCACATCAAAATATGTACATCGAGAGTGTTTGGATCATTGGCGAGCTGTTAAGGAAGGGTTTGCATTTGCTCACTGCACAACCTGCAAAGCTCCTTATCATTTGCGTGTTCATGTTGCTGTTGATAGGAAATGGCGAACCTTGAAGTTTCGATTCTTTGTTACCAGAGACGTTTTGTTTATTTTTCTGGCCGTCCAGCTAGTCATTACTTCACTTGCTTATTTGGTTTATCTAATAGATGGTTACCAGCAGTCCTGGCTTCGTCTTATATGGGGTTTTGAGAGTGAGCTTAGCTTTTACTATTTATGTGGAGCTTTATTGTTTTTCTCCTTGCTTGGCCTATCTGGGTGTTTCATTACTTGTTATGATCGGAGGGTGCGCAGTGATTTGGCTCAGCCTTGTCGAGAATTATGCCTTTGTTGCTGTCACCCTGGAGTTTGTGCAGACTGTCATTTGCCAGGCACTCTTTGTATGTGGACCGATTGCACCGCATGCTTTGAGAGTTGTGGAACTATGGCTACTGAATGTGGTGGTTGCTTGGGAGGTGCTGGGGAAGCAGGGTTGCCCTTGTTACTCATAATGGGATTGATTGTTCTAGGACTTTTTACTGTAATAGGGATATTTTACAGTGTATTGGTGGCTACCATGGTAGGGCAACGGATATGGCAGCGACATTATCACATACTTGCAAAAAGGATGCTAACAAAGGAGTATGTGGTTGAGGATGTTGATGAGATGGCAGGGTCTGATTGGTCTCCCCCATCTCTGCCACCCGAGCATGTTCAGCAGCTGAAAACACTAGGCCTCCTATGA 969 0.4561 MADHSDTSPLVSPPSITDPNEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHVAVDRKWRTLKFRFFVTRDVLFIFLAVQLVITSLAYLVYLIDGYQQSWLRLIWGFESELSFYYLCGALLFFSLLGLSGCFITCYDRRVRSDLAQPCRELCLCCCHPGVCADCHLPGTLCMWTDCTACFESCGTMATECGGCLGGAGEAGLPLLLIMGLIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDEMAGSDWSPPSLPPEHVQQLKTLGLL 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0245 322 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Acco13g0245 322 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 321 - -
Acco13g0245 322 CDD RING_CH-C4HC3_MARCH 34 82 - -
Acco13g0245 322 SMART ringv_2 33 82 IPR011016 GO:0008270
Acco13g0245 322 SUPERFAMILY RING/U-box 29 86 - -
Acco13g0245 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 95 IPR013083 -
Acco13g0245 322 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco13g0245 Acco-ChrAcco13 1697090 1700276 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0245 1 322 C3H Transcription Factor Family AT2G22120 83.025 0.0 545