Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0243 ATGCAAGCTCTCTCTGATTTCTTCTTTCAACTCTACGCAAAGACCATCGTCCTGTTGGTCTTCTTGCTCATAGAGCTCATCATCCTCGTCCGAAACCTCGAAACTCACTCACCTCCAATGACTCTCTCCCAGTACCTCCGACTCATCGAAGAGAAAAACCCAACCGTTTGTTTCACCAGAACACTGAACATGGCTGACCAACTAGAGTGCAGGGTTTGCTTATCTGAGCTTCAAGAAGGCGACAAAGTTAGGACCTTGAAATGTAAACACACATTTCACCAGGAATGTTTGGACCAGTGGTTGCTTCAGTTTTGGGCTACTTGTCCTCTCTGTAGAAACAGAGTCCTCTCAGAAGATGTCGTCGCCGATTATCGACGGCTTCGAAATCAGGTGAATCATGATGACAACGATGATAATGTAAACCGCCCAATTATGCGTTTGTTTTTTGCATTACGTCGTGTTATCACCCTGCAGAAGGGAACTGATCATCTTTCCCTTTTGGGATTCCTCGGAAGATTAGTGATGCAGTCTCAGCTGTATGTACTAAGATTATGTGAATGGGCTGGTGGATCTCTGGAAATTGTGGAAATATTAAAGTTCCTATCAGTCCAGTTCATGTTGAAAATATCTCAGCGGAAGAAGATATTTGTAGACATATTACTCTGCAGATTTTCACGGAGTTGTATTCTCACGGCAGGAGTAGTGACTGGTCAGGCAATAGTAAAAACGAGAAGGATGCTACAGCAAGTTGGATTTTCATGGTCTACAGGGAATCTTTTTTCACACAGTGACATTGATGATTGGGTAGGTGGAGATGTTAGAAGGACCACTCTGTTTTTCCTTCCATCTCGTCTGCTTTGGATCTGGATTTTTATGGTTTATTTCACAGGAGAATTATGGGCAGATATCACATTTCCAGAACTGCCAATCCATGTTGGTTTCCCAGAAAGGCAGAAAAAGTACCTTGGTAGATATGGGTGA 981 0.4312 MQALSDFFFQLYAKTIVLLVFLLIELIILVRNLETHSPPMTLSQYLRLIEEKNPTVCFTRTLNMADQLECRVCLSELQEGDKVRTLKCKHTFHQECLDQWLLQFWATCPLCRNRVLSEDVVADYRRLRNQVNHDDNDDNVNRPIMRLFFALRRVITLQKGTDHLSLLGFLGRLVMQSQLYVLRLCEWAGGSLEIVEILKFLSVQFMLKISQRKKIFVDILLCRFSRSCILTAGVVTGQAIVKTRRMLQQVGFSWSTGNLFSHSDIDDWVGGDVRRTTLFFLPSRLLWIWIFMVYFTGELWADITFPELPIHVGFPERQKKYLGRYG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0243 326 SUPERFAMILY RING/U-box 54 117 - -
Acco13g0243 326 PANTHER - 1 153 - -
Acco13g0243 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 125 IPR013083 -
Acco13g0243 326 SMART ring_2 70 111 IPR001841 -
Acco13g0243 326 Pfam Ring finger domain 69 112 IPR001841 -
Acco13g0243 326 ProSiteProfiles Zinc finger RING-type profile. 70 112 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0243 Acco-ChrAcco13 1686378 1687920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0243 69 126 C3H Transcription Factor Family AT1G15100 53.448 2.13e-17 76.3