Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0224 ATGATGGCAACTATAGGTATGTGTGATAAAATCAGCAGCCTGGCATCAGATTTCATAGATCCATATGATGAAGATCTGACGAAGGCACTTGAACCTTTTATGAAAATGGATTCACCGACATCGTCTCTATCTTCTATCTCTCTTCCATCATCACCTTCCTGCTCTTATACTTCACCCACTTCTATGTCCAGTTATCATCCCAACCTCCGTACAGTATCAAGCTCCCACATATTTTCTCCTGGGTTCTCGAGTAGCATAGGGCTTAACCAACTCACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCTGGGCCGACAGCAACAATCCCTCGATTTCCTCAGTCCTAAACCTGTCTCCATGAAACATGTCCGTAATGCTCCGAAACCCATGAAACTATACCGAGGAGTGAGACAGAGGCATTGGGGGAAATGGGTGGCTGAGATCAGACTTCCAAAGAATCGTACCCGTCTCTGGCTCGGCACTTTTGACACCGCCGAAGAGGCTGCTTTGGCTTATGACAACGCTGCTTATAAGCTGAGGGGTGATTTTGCTCGCCTCAATTTCCCTCACCTGCGACACCAAGGAGCTCATGTGTTTGGTGAATTTGGGAATTTCAAGCCTCTTCATTCCTCCGTCGATGCCAAGCTTCGAGCTATTTGTGAAAGCTTGGCCAATTCCCAGAAACAGGGGAGTGCAGGGGAAACTTGCTCCGTCGGCGATTCAAAGCCTGAGGCGGTGCCGGAAGAGTCAGAATCAAAGAGTGATGTGGAGGATTGTAAGGTGGAGAACACAGCATCGTCGCCTTTGTCTGATGAATCCTGGGCGGGGTCGTCTTCCCCTGAATCTGACATCACTTTCTTGAATTTCTCTGATTCCAAGGATGATGAGACCATCGACTTTGGGCTGGAGAAGTTTCCTTCCGTGGAGATTGATTGGTCTGCTATTTGA 951 0.4784 MMATIGMCDKISSLASDFIDPYDEDLTKALEPFMKMDSPTSSLSSISLPSSPSCSYTSPTSMSSYHPNLRTVSSSHIFSPGFSSSIGLNQLTPSQILQIQAQFLGRQQQSLDFLSPKPVSMKHVRNAPKPMKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGDFARLNFPHLRHQGAHVFGEFGNFKPLHSSVDAKLRAICESLANSQKQGSAGETCSVGDSKPEAVPEESESKSDVEDCKVENTASSPLSDESWAGSSSPESDITFLNFSDSKDDETIDFGLEKFPSVEIDWSAI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0224 316 Gene3D AP2/ERF domain 133 191 IPR036955 GO:0003700|GO:0006355
Acco13g0224 316 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
Acco13g0224 316 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Acco13g0224 316 MobiDBLite consensus disorder prediction 262 282 - -
Acco13g0224 316 MobiDBLite consensus disorder prediction 230 282 - -
Acco13g0224 316 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Acco13g0224 316 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Acco13g0224 316 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Acco13g0224 316 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Acco13g0224 316 MobiDBLite consensus disorder prediction 245 261 - -
Acco13g0224 316 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Acco13g0224 316 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 15 316 - -
Acco13g0224 316 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0224 Acco-ChrAcco13 1590749 1591699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0224 20 316 AP2-EREBP Transcription Factor Family AT4G39780 51.007 9.71e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco13g0224 AP2 7.7e-15 CL0081