Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0205 ATGGGAAGATCACCAAGCTGTGATGATACTGGTTTGAAGAAAGGCCCTTGGATTCCTGAAGAAGATCAGAAGCTTGTCAACTTCATTCAAGAGCACGGTCATAGGAGCTGGAGTGCTCTTCCAAAACTAGCAGGGCTGAACAGATGTGGGAAAAGTTGCAGGCTACGATGGACGAATTACTTGAGGCCTGACATAAAGAGAGGGAAGTTTTCTCAAGAAGAACAACAAACAATTCTGAGACTCCATGCTATCCTGGGAAACAAATGGTCGGCGATTGCAAACCAGTTACCGGGACGGACAGATAATGAGATCAAGAATTTCTGGAACACCCATCTAAAGAAGAAGCTGATCCAAATGGGTTATGATCCGATGACACACCAACCTCGAACTGATCTTTTCTCAACTTTGCCTCATCTCGTAGCACTGGCTAGTCTCAAAGAACTTTTGGACCACAATCAACCATGGCAACAGAGTGTTGCTTTGAGACTGCAAGAAGAGGCTGTTCAATTGGCCAGACTTGAAGGCTTACAACATCTCTTGTACCCTCAGCCTCAGCCTTCTGCAACTGAAGCCTGTGACTTCACGAACTTGGATACCATTAATATTAATCCTCTGGAGTCCCTGAATCTGACAAACAATAACATAAATAATAATCCACCTCCAATTGGAGTCAACAATCTCCAACTGGGCTATGACTCGTTATTCTCTAACATGCCAGAGTTGAGATCGCCACGTAACTATCATCAACCACCATCGTCGTTAAGTCAGATAGAAAGTTCTTCCAATTCACCCTGGCTTCTTTCATGCTCAAGCAGTAATCTATCTACTTCCATTTTGCCGGAGATTTCAATGACAAATACTCTTAATCATGGAGAAGTGGGCCCTTCCATGTGGCCCGACCTTCTGCTGGAGGACCCTTTGTTCCATGAGATTTAA 936 0.4423 MGRSPSCDDTGLKKGPWIPEEDQKLVNFIQEHGHRSWSALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEQQTILRLHAILGNKWSAIANQLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDLFSTLPHLVALASLKELLDHNQPWQQSVALRLQEEAVQLARLEGLQHLLYPQPQPSATEACDFTNLDTININPLESLNLTNNNINNNPPPIGVNNLQLGYDSLFSNMPELRSPRNYHQPPSSLSQIESSSNSPWLLSCSSSNLSTSILPEISMTNTLNHGEVGPSMWPDLLLEDPLFHEI 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0205 311 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco13g0205 311 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco13g0205 311 CDD SANT 69 112 IPR001005 -
Acco13g0205 311 FunFam MYB transcription factor 68 129 - -
Acco13g0205 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 249 - -
Acco13g0205 311 CDD SANT 16 61 IPR001005 -
Acco13g0205 311 Gene3D - 68 131 - -
Acco13g0205 311 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco13g0205 311 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco13g0205 311 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco13g0205 311 Gene3D - 13 66 - -
Acco13g0205 311 FunFam MYB-related transcription factor 13 66 - -
Acco13g0205 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco13g0205 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco13g0205 311 SMART sant 13 63 IPR001005 -
Acco13g0205 311 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0205 Acco-ChrAcco13 1444989 1446239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0205 1 311 MYB Transcription Factor Family AT5G10280 48.406 1.80e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0205 Myb_DNA-binding 1.6e-14 CL0123