Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0177 ATGGGATTGTCCAACTTCCCCGTTGCACCAGAGGGGTTGCTTCCGGTGCTGGTCATGAACACCGTTTTGTCGGTGGCTATGTTGAAGAACATGTTGAGGTCTCTTCTGCAAGTGGTTGCTTGGAACCCAATAGATATGAATGTGGAGCAAGAGGGTGATGATGACGAGCAGACAAGTGTTTCGAGGAGGAGGGTGTCCATTACGCAGTACAAGTGCATGAGTGACGGCGGAGCAAGGTGGCGCATGGCGGAGTGCTGTGTGTGTCTGTGTGGTTTCCAAGGCAGCCAAGAGGTGAGCGTATTGTCTTGCAAGCATTTCTTCCACAGAGCTTGCTTGGACAAGTGGTTCCTCAACAGACACACTACCTGCCCTCTCTGCCGTTCCACTTCTTAA 393 0.5191 MGLSNFPVAPEGLLPVLVMNTVLSVAMLKNMLRSLLQVVAWNPIDMNVEQEGDDDEQTSVSRRRVSITQYKCMSDGGARWRMAECCVCLCGFQGSQEVSVLSCKHFFHRACLDKWFLNRHTTCPLCRSTS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0177 130 CDD RING-H2 85 127 - -
Acco13g0177 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 130 IPR013083 -
Acco13g0177 130 SUPERFAMILY RING/U-box 84 129 - -
Acco13g0177 130 PANTHER - 1 129 IPR044249 -
Acco13g0177 130 Pfam Ring finger domain 84 127 IPR001841 -
Acco13g0177 130 SMART ring_2 85 126 IPR001841 -
Acco13g0177 130 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0177 Acco-ChrAcco13 1276462 1276854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0177 1 128 C3H Transcription Factor Family AT2G04240 32.026 8.73e-19 75.5