Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0173 ATGCCTACCCGTTCTTCACTTTCACTCGATACCCACGATTCTTCCTCTTTGAAGCGGAAGAGGCCTCCCAATATTGAGATACCAGACGTCTTGCAAGAAATTCAGACACCCAAGCTTAATGATTCCAAGGCATTGAAGGACAACGTTTCTCTTAGCGGGATTGGTTTTGGGGTTTTTTCTGTAAAAGGCAAGAAACTGTGCATGGAAGATGCTCACAAGATTGCTTCTTCTTTAGAGAGCGACCCAAAAAAAGGCTTCTTTGGCGTCTACGATGGGCATGGCGGCCGGAAGGCTGCAGAGTTTGTCGTTGAGAACTTGCACGCCAATATTCTCGAAATGGTGGACAATCGTGAAGAGTCAAGGACCAAGGAGGAGGAAGTTAAAGCTGGGTATCTAAAGACCGACGAAGAGTTCTCAAAAAAAGGTGTAGGAAGCGGTGCCTGTTGTGTGACAGCCCTGATTCGAGGGGACGAGATTGTTGTTTCAAACGTGGGAGATTGCAGGGCTGTTCTTTGCAGAGGTGGAGTGGCTGAAGCTCTCACTAGAGATCACAGAGCTGAACTAGAGGATGAACGGAAAAGAATTGAGGAAAAGGGAGGATATGTGGAGATACATCGAGGAGCTTGGAGAGTTCATGGGGTGCTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAGGAATGGGTGGTGGCTGAACCTGAAACCAAGATCTTACAATTAACTGCAGACATGGAGTTTCTTGTGTTGGGGTCTGATGGACTGTGGGATAAGGTCGGCAACCAAGAAGCTGTTGACGCTGTGAAGCGTGTTTGTCGAAATGAGGAGAAGCTAGGCTCCGATGTACAGAATGACATTGATGTTGATGATTATGTCCAAGTTAATGTAAGTCCATCATCGAAGCTACGAAGAGTTTCGCTTGTGAAGCAGCCTAGGGGCCATAAAAAGGCACAGAATGGCTGGAATGAAGTTGGTGAAGATGAATTTGGTTGTGAAAATGAAAGCCCTCCATCAAAATCAAGAAGAATTTCATGCGTGAAGCGAACGAGCATGAAGAAAGAGATGCCGGTAAAAGAAAGCAACGTGTGCAGGAAAAGTGAAGGCTCTGGACTTCTTGCGGCTTGTAAGGAGCTTGTAAACCTTGCTGTGAAAAGGGGGACTTTGGATGATGTCACTGTAATGATAATCGACTTAAAACACTACAAGTGCAACATCTGA 1218 0.4598 MPTRSSLSLDTHDSSSLKRKRPPNIEIPDVLQEIQTPKLNDSKALKDNVSLSGIGFGVFSVKGKKLCMEDAHKIASSLESDPKKGFFGVYDGHGGRKAAEFVVENLHANILEMVDNREESRTKEEEVKAGYLKTDEEFSKKGVGSGACCVTALIRGDEIVVSNVGDCRAVLCRGGVAEALTRDHRAELEDERKRIEEKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKEWVVAEPETKILQLTADMEFLVLGSDGLWDKVGNQEAVDAVKRVCRNEEKLGSDVQNDIDVDDYVQVNVSPSSKLRRVSLVKQPRGHKKAQNGWNEVGEDEFGCENESPPSKSRRISCVKRTSMKKEMPVKESNVCRKSEGSGLLAACKELVNLAVKRGTLDDVTVMIIDLKHYKCNI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0173 405 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Acco13g0173 405 SUPERFAMILY PP2C-like 48 400 IPR036457 -
Acco13g0173 405 Coils Coil 178 198 - -
Acco13g0173 405 PANTHER PROTEIN PHOSPHATASE 2C 43 397 IPR015655 GO:0004722|GO:0006470
Acco13g0173 405 ProSiteProfiles PPM-type phosphatase domain profile. 55 398 IPR001932 -
Acco13g0173 405 SMART PP2C_4 41 396 IPR001932 -
Acco13g0173 405 Gene3D - 49 403 IPR036457 -
Acco13g0173 405 CDD PP2Cc 54 284 IPR001932 -
Acco13g0173 405 MobiDBLite consensus disorder prediction 1 24 - -
Acco13g0173 405 Pfam Protein phosphatase 2C 55 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0173 Acco-ChrAcco13 1261927 1264168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0173 2 402 PP2C-type Phosphatase Gene Family AT1G67820 53.086 2.66e-131 382