Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0169 ATGTTGGGCGAAGAGGGCAAGGAGTGTTCCGCCGATGGCGGCAGCGGTCGGAGAACATATTCACGTTCTGTTTCTTGGACTGATCGTTCTCCGACCAACATTAGCCAGAACCGCCGGCCGCCGACAAATAGTAAGCCCCGGCCATTGTTGCCTCCTCTCCAGCCTCTCTCCATCATGAAACGGACGGCTGAGGAGTGGCCAAGCGCGGGATCTGACGATCTTGGAATTTGGCCTCTTCCACAAACCCCAAGAGGGTCCGTCAAAGCCCTGGAGAGTTCTGATTCGGGTCAACCCGCAAAAGAATTTCAGTTCAAGAGGGACAAGTTAGCGTTTTTTGACAAAGAGTGTTCCAGAATCGCGGAGCATATATATCTAGGGAGTGATACAGTGGCAAAAAATCACGAGCTTTTGAGGCAAAACGGGATTACCCATGTGCTCAACTGTGTCGGGTTTGTTTGTCCTGAGTATTTCAAAAGCGATTTTGTGTATAAGACACTCTGGTTGCAAGATAGCCCCACCGAGGACATCACCAGTATCCTCTACGATGTTTTTGATTACTTTGAGGATGTCCGAGAGCAAGGCGGGCGTGTTCTCGTACATTGTTGCCAGGGAGTTTCTCGATCAAGCTCTCTGGTAATTGCATATCTCATGTGGAGAAAAGGTCAGAGCTTTGAAGATGCGTTTCAGTATGTGAAGACTGCACGAGGAGTGACCAATCCAAATATGGGTTTTGCTTGTCAACTTCTTCAGTGTCAGAAACGTGTACTTGATATGCCCGCAAGTCCAAATTCCATTCGTAGGATGTATCGAATGGCTCCTCACTCACCTTACGACCCTCTTCATTTAGTCCCCAAAATGGTAAACCATCCAGGTGCTCGAGCTCTTGATTCTCGTGGAGCGTTCATTATTCATGTTCCTTCTACTATATATGTTTGGAGTGGAAAAAGTTGCAGTACGGTGATGTCATGTAATGCAAGGGCTGCAGCATATCAGGTCATACGTTATGAGAAGGCAAAGGGTCCAATTCAGAGTATCAAAGAAGGTGAAGAACCTCTGGAGTTTTGGACTGCTCTTGCTAATGAGCAAATCTTATCAGGCCATGAAAGCGTGGAGGTTCGTGAAGCTGGTAATAGTATGGAGATTGGTGCGAGAAAGGTTAGTGAGTATGATTTGGATTTTGAAATTTTCCACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTCCCCGTTTCTAGTGCTGGATCAGAAACTTGCTTACCTGCTAGAGAAAACGGTTGGAGTAGACTGAGAAGGAATTTTGCTCTTGGTATGATGAAAGAATGGCTCGCATCGTCCTGTAAATGGAAGAGTGAAGTTATTACTACCAAATCCGAAGACGAGTGCTGTGTGATTATGCAAGAAGGAGAGCAAGATTTTGTAGTTGATCCTAATTTATCACCAGCATCACCAACCTATCCCTGTGGTTCCCCTGATTCTTTTGAATGTTTTCCAGATAACCGATCAGACATGGCAAAGGATAGCCCTATTGAAGTCATGGAGGATTTTTCTGCTCTTCCCACGTCAGATTCTTTTTCTTGTTTTCTAAGCAACAGCCCAAAGTTCAACTCGAAGTCCCCAACACTCTCACCCTCCAGTTCTGATTATGCCAGTTCTTTTACATTTTCACCTTCTTCTATAACTTGGTCTGACTTGTCGCATATGTCTTCTAGGCAGCCATCACCATCTAGCATCGAACCAACTGATCCTTTTTATGCCAAAGATCTTTCTTTCTCAGAGAACTCTTTAATTCTCAAAGCTGTTTCGTCGCCTAAAGAGGAGCCATTTTGTGCTAACCACACAATGGGAGGGGTAAACACCTATCTGCAGAGTGAAGGATCTTTTCCTTCCCTTGCAGAGCGCAGAGGGAGTAATCCTCCGCCTCGTATGTTCCTTCCCTCTATCAACGAATCATCTCACAGCCACACCAAACTTGTAAGAACAGAGTCATTCTCTTTGCCTGACTTAGACGGTAATGTAATGGAAGATGTTAGTTTGAAGCAATCTGATCAAGAAAACAATGGAAAAGGGCAAGAGCCAATAGAACATGCTGATATTAGCTCAGGTGATGAATTGCAGGGTGAAAATAATGACACTGATCATAATATGCGATTGTGTTATGTGACATAG 2166 0.4511 MLGEEGKECSADGGSGRRTYSRSVSWTDRSPTNISQNRRPPTNSKPRPLLPPLQPLSIMKRTAEEWPSAGSDDLGIWPLPQTPRGSVKALESSDSGQPAKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWRKGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVLDMPASPNSIRRMYRMAPHSPYDPLHLVPKMVNHPGARALDSRGAFIIHVPSTIYVWSGKSCSTVMSCNARAAAYQVIRYEKAKGPIQSIKEGEEPLEFWTALANEQILSGHESVEVREAGNSMEIGARKVSEYDLDFEIFHKALAGGVVPPFPVSSAGSETCLPARENGWSRLRRNFALGMMKEWLASSCKWKSEVITTKSEDECCVIMQEGEQDFVVDPNLSPASPTYPCGSPDSFECFPDNRSDMAKDSPIEVMEDFSALPTSDSFSCFLSNSPKFNSKSPTLSPSSSDYASSFTFSPSSITWSDLSHMSSRQPSPSSIEPTDPFYAKDLSFSENSLILKAVSSPKEEPFCANHTMGGVNTYLQSEGSFPSLAERRGSNPPPRMFLPSINESSHSHTKLVRTESFSLPDLDGNVMEDVSLKQSDQENNGKGQEPIEHADISSGDELQGENNDTDHNMRLCYVT 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0169 721 ProSitePatterns Tyrosine specific protein phosphatases active site. 199 209 IPR016130 GO:0016311|GO:0016791
Acco13g0169 721 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 257 IPR020422 GO:0006470|GO:0008138
Acco13g0169 721 MobiDBLite consensus disorder prediction 679 721 - -
Acco13g0169 721 SMART VILL_6 267 361 IPR007122 GO:0051015
Acco13g0169 721 Gene3D Protein tyrosine phosphatase superfamily 89 256 IPR029021 -
Acco13g0169 721 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 235 IPR000387 GO:0016311|GO:0016791
Acco13g0169 721 CDD DSP 116 250 - -
Acco13g0169 721 MobiDBLite consensus disorder prediction 688 710 - -
Acco13g0169 721 SUPERFAMILY Actin depolymerizing proteins 261 362 - -
Acco13g0169 721 MobiDBLite consensus disorder prediction 16 43 - -
Acco13g0169 721 PANTHER MKPA PROTEIN 13 656 - -
Acco13g0169 721 SMART dsp_5 115 254 IPR020422 GO:0006470|GO:0008138
Acco13g0169 721 Gene3D Severin 268 364 IPR029006 -
Acco13g0169 721 Pfam Dual specificity phosphatase, catalytic domain 123 253 IPR000340 GO:0008138|GO:0016311
Acco13g0169 721 MobiDBLite consensus disorder prediction 1 60 - -
Acco13g0169 721 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 256 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0169 Acco-ChrAcco13 1237951 1240116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0169 39 151 Protein tyrosine phosphatase (PTP) family AT3G55270 52.500 6.40e-31 127