Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0159 ATGGACAACGTTGGAGGAAGTTCGTCTTCGAATATCAACGACAACAGTGGAATCAAGGAGCAGGAAAGGTTGTTGCCGATAGCGAATGTTGGTCGGATCATGAAGCAGATACTGCCTCAGAACGCCAAGATATCTAAGGAGGCCAAGGAGACCATGCAAGAATGCGTGTCGGAGTTCATAAGCTTCGTGACGAGCGAGGCATCTGACAAGTGCCGGAAGGAGAGGAGGAAGACGGTGAATGGGGATGACATATGCTGGGCCTTGGCCACGCTTGGTTTTGATGACTATGCTGACCCACTGAGGAGGTATCTGCACAGATTTAGAGAGTTAGAGGTTGACAGAGCAAATACTAATAGCCCTCATGACAGGGATGACCTCGATCAAATTCCCTCCACAGGAGTCAGGCAGTCATAG 414 0.4976 MDNVGGSSSSNINDNSGIKEQERLLPIANVGRIMKQILPQNAKISKEAKETMQECVSEFISFVTSEASDKCRKERRKTVNGDDICWALATLGFDDYADPLRRYLHRFRELEVDRANTNSPHDRDDLDQIPSTGVRQS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0159 137 MobiDBLite consensus disorder prediction 115 137 - -
Acco13g0159 137 FunFam Nuclear transcription factor Y subunit B-3 13 135 - -
Acco13g0159 137 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 121 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco13g0159 137 Gene3D Histone, subunit A 11 132 IPR009072 GO:0046982
Acco13g0159 137 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
Acco13g0159 137 SUPERFAMILY Histone-fold 21 127 IPR009072 GO:0046982
Acco13g0159 137 MobiDBLite consensus disorder prediction 115 129 - -
Acco13g0159 137 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Acco13g0159 137 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Acco13g0159 137 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Acco13g0159 137 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0159 Acco-ChrAcco13 1186718 1187131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0159 3 116 CCAAT-HAP3 Transcription Factor Family AT2G47810 65.891 1.72e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco13g0159 CBFD_NFYB_HMF 1.3e-27 CL0012