Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0146 ATGCAGAACGAGGAGGGACAGATCACCGAACTCTACATTCCAAGGAAATGCTCCGCAACAAATAGACTGATAACTGCAAAGGACCATGCGTCCGTGCAGATTAACATTGGGCATCTGGACGAGACCGGTACCTACAATGGTCAGTTCTCCACATTTGCCATGTGTGGGTTCATACGCGCCCAGGGGGATGCTGATAGTGCATTAGATCGTCTGTGGCAGAAGAAGAAAGGCGAAGTCAAGCAACAGTAG 249 0.498 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDETGTYNGQFSTFAMCGFIRAQGDADSALDRLWQKKKGEVKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0146 82 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Acco13g0146 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Acco13g0146 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 78 IPR001931 GO:0003735|GO:0005840|GO:0006412
Acco13g0146 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Acco13g0146 82 Gene3D - 1 81 IPR038579 -
Acco13g0146 82 FunFam 40S ribosomal protein S21 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0146 Acco-ChrAcco13 1114621 1115413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0146 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 82.716 3.81e-50 150