Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0140 ATGCGCATGGACCCTCTATACCCTAAACCTCGATCCTATGCACCACAAATGGAGATGACGATTCCCCCCTCCCAGCTTTCCGACAACGATCGGAGCAGCTCCGAACTTCGAGCTCTCGATTGCAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATCGTGCTTCATGCAATGGGTTCCACTTATCACCTCCATCGCCTTATCCTTTCTCGGAGTTCTTACTTCAGAAATATGCTTCATGGTCCCTGGAAAGAAGCCGGTGCTCCTATTGTCTCGCTGCATGTTGATGATAAGAATGTCAATGATGAGGCAATCACAATGGCTTTGGCTTATCTCTACGGGCACCACCCTAAGCTTGGTGATAGTAATGCATTTCGTGTTCTTGCTGCAGCATCCTTTCTTGACCTCCAGGACTTATGTGCAATATGCACAGACTTCATTATATCTGAGCTATGGACTTCAAATTTCTTGGCTTATCAGGTTTTTGCAGAAAACCAAGACTATGGCATTCATGGGGAGCGTGTAAGAAATGCTTGTTGGGGCTATCTCTGTCAAAGTGGTGGCATGGAGTTGAAAGAGGTGCTTCCGAAACTTTCTTCTCAAACTTTACATGCATTACTGACCTCCGATGAACTGTGGATTCCAAGTGAAGAGAAACGGTTTGAATTGGCACTACACACGTTCCTGGCAAAAAATGCTCACTGGAAAGCTGAGCATCCTGAGCAAGGGAGTTCTGGTTCTGAGTCTGCAACTAGTACTCATTCTGATTCTGATAATATTAAGGGAAAAAGTGGAGCTGACAGCAGTACAAGTAATAGGTTGGGAACTGATATAGAGCGTCTGAATATTAAAAGTGATGTAAAGGACATCATTGATCATAATTTGCGAGTTGAGCTTGTAGACAGTGTGGAACACCTCAACAATGAGGATTCTGATTCTAATCAACTGGCACAAGCGACATCATTTGCTGGTTCATCAAATTTGGAACCTAGATGTGCTTGCAACATGGAAGGGCCTTTGTCAATCGGTAATTTAGTGTCAGAAAAAGATGGGATCAGAACATCATGTTGTTATGTTGAGATGCCTCCCAGTGCTGGCTCAACTGGAGTGGCTATTGAGGGGCCATCTGAGGAAGGGTCAAATTCTTCCTGCAATGGCCTCACATCCAGTGATTGGGGAAGATACAATGTTTCTCTTTTTCCATGGGGCAGCCGGGTAGTTGGTGGAAGACGGCTTAAAGCTCACTCCAAAGGAAAGTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTCGAGGCACTTCTGAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCATGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTGCAAGAAATTGCTGCTGATACATGCAAAACTTGTTGCCTTGTGAGTGCAGCATGCACTTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTTCCACTCCTAGTTACTACGTGCAAGAACATAACCCGAGTAATAATTCTGGGAACACGGGAAACATATATGTTGCCGAGTCTTCTCAAAGTGAAGGAAGTGGGATATTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGTAGAGGAACTACATTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGTGTGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCAGCTAATGATGACTCAGAGGCACAAGCTGACCACAATGGAGACATGTCTGGAGATGGATTGACAGCTTTGGTTGGGCTAAGCCAAGGAGGGAGTAGTGGAGCCAATGCACATGGAGAAATGGCACAAAGGGGATATGAGACTGGCATGAGAAGCAAGATTTCTGGAATTGCTGCGGGAAGCCCAAGTACTGGTGGCATTCCCATGCAATTGTTAGAGGCACCAGAACATACCATAGGAATAGAATGGGAGAATACTAGTAATTCTTCCATATCGTTGGATTTGAAAACACCTTTAACCCATTTTCCTCCATTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAGGTGTTCTATGCTGGTTCTCTGTGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGAGAACTCTTGGGCTGTTTCTTCACCGTCGGAAAGCAGAGGTTGCTGATTTACATAGAAAGGTGCACATGTATGTGGATTCTCGCGAAAAGGTGACTGCTCGCTATCAGTTGATATGCCCATCAAAAAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAAACGGGCACTCTTCTGCCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTGTTTGACGAGCTTGCGGATCTTCTGCAGAACGGGGCCCTTCGAATAATTGCCGTGGTGCAGCTCGTTTAG 2556 0.455 MRMDPLYPKPRSYAPQMEMTIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDIVLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEAGAPIVSLHVDDKNVNDEAITMALAYLYGHHPKLGDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALHTFLAKNAHWKAEHPEQGSSGSESATSTHSDSDNIKGKSGADSSTSNRLGTDIERLNIKSDVKDIIDHNLRVELVDSVEHLNNEDSDSNQLAQATSFAGSSNLEPRCACNMEGPLSIGNLVSEKDGIRTSCCYVEMPPSAGSTGVAIEGPSEEGSNSSCNGLTSSDWGRYNVSLFPWGSRVVGGRRLKAHSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKTCCLVSAACTCRQPFAFSQGVSTPSYYVQEHNPSNNSGNTGNIYVAESSQSEGSGIFRPVRVHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRVPFGVGNRNYPQSAANDDSEAQADHNGDMSGDGLTALVGLSQGGSSGANAHGEMAQRGYETGMRSKISGIAAGSPSTGGIPMQLLEAPEHTIGIEWENTSNSSISLDLKTPLTHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEVADLHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0140 851 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 15 851 - -
Acco13g0140 851 SMART BTB_4 61 161 IPR000210 GO:0005515
Acco13g0140 851 MobiDBLite consensus disorder prediction 252 283 - -
Acco13g0140 851 Gene3D Potassium Channel Kv1.1; Chain A 27 194 IPR011333 -
Acco13g0140 851 MobiDBLite consensus disorder prediction 246 283 - -
Acco13g0140 851 MobiDBLite consensus disorder prediction 1 33 - -
Acco13g0140 851 SUPERFAMILY POZ domain 55 159 IPR011333 -
Acco13g0140 851 ProSiteProfiles BTB domain profile. 61 131 IPR000210 GO:0005515
Acco13g0140 851 Pfam BTB/POZ domain 55 159 IPR000210 GO:0005515
Acco13g0140 851 MobiDBLite consensus disorder prediction 18 33 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco13g0140 BTB 5.5e-14 CL0033