Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0139 ATGCCTTCTCCTTCATGGCTCACAAGCTTCTCTTGTTCCCCTTCCCCCATAGAATCCTCTTCACTAGCCTTCTTCTTCCTATCTCCATGTCCTCAGAGAGTTTTGTTTTCCTTTGTTGATCTCTTCTTCTTGCTGATTCTTTTAGCCTTCTCCCTTCGGAAACTCTGTTCTCGACCCTGTTCTTATGCCATTACCACCTCATCCATAGCTAAGGACTCACACTACAAAGTTACTTTCTTTTTCCATTTTTCTTTCTTTTTAGTCATTCTGTTGGCAATAGCTTACGTGGTTTTAAGCATCTTAACCTTCACTCAGGACACCTCTCTTCAGACTTCATGGAAACTCATCGAAGCCCTGTTTCGGGGTTCTCAAGCAATAACCAACGTAGTGGTTTTGCTTGTGATGGTGAACGAGAAGAGGATTAAAGATACTAAACATCCCTTGCCACTGAGAGTCTACTGGGCAGCAAATTTGGTTATTTCTTGCTTATTCGCTGCTTCGGGCATTTATCGTTTAGTAAACATTGGTGTAGCCAACTTGGAGTTTGATTTGAAGATTGACGATATATTCTCGATCGTAAATCTTCCTGTGGCTGTTTATCTATCACTAGTAGCTGTTAAAGGGTCATCGGGGATTAATGTAGTCAAAAGACCAGACTTAGATTCGAGTTCCGCAGAACCATTATTGAGCCAGAGAATTTTAAAGGAAGAGAATTTGAGTCCTTACGCTAATGCTTCCTTGTTGTCCAAAATGATGTTTCTGTGGATGAACCCTCTGCTCCAAAAAGGCTACAAATTTCCCCTTAAACTTGATGATGTGCCTTCACTTCCTCCTCAGTTTCGAACTGAAAAAATGACACAGCTTTTTGCGAGGAATTGGCCGAAGCCGGAGGAAGATTGCAAATATCCAGTAGGAATCACACTACTCCGATGCTTCTGGAAAGACTTCATTTTCACTGGCATTTTGGCTGCCATTAAACTTGTGGTTTCGTTCGTAGGGCCAGTGCTTATTCAAGAATTTGTTGATTACACCTCTGTGAAAAAAAGGCCAGACTCACAAGGATTTGTTTTGGTGCTGATCCTGCTTCTGGCAAAATCAGTTGAATGCCTCAGTAGCCACCTGTTCGGTTTTCACAATCGGAAACTGGGTATGCTAGTTCGTTCCAGCCTCACGACTTCTTTATACGAAAAACTCATGAGATTGACAAGCTCGGCGAGGCAGACTCATGGGGCTGGACAGATTGTGAATTACATGGCTGTGGATGCTCAGCAGTTACATGACATGATGATGCAGCTGCATAATATTTGGATGACGCCTTTGCAAGTTGTAGCTGCTATGGTTTTGATGTATCTCTATGTCGGCTTATCGGCGCTCGCGGCCTTGCTTGGGGCCATTGCAATGTTTGTGTATGCACTACTGGGTTCAAAAAAGAACAACACGTTCCAGTACAGTATAATGGTGAATCGTGATCTGAGGATGAAGGCCACGACTGATATGCTTAATAACATGCGTGTCATTAAGTTCCAAGCATGGGAGAAGCATTTCGGCAGCAAGATACAAAATTTTCGTAACTTGGAGTATCATTGGATTGGCAAGTTCATGTATGCTTTTTCTAACACCCTTGGGATTTTCTCGACTTCTCCTATTATGATAGCAATTCTTACCTTTGGAGCAGCAATTCTTCAGGGATATCATCTTGATTCCGGCACTGTGTTTACAGTAATATCAATGATCAAAATACTGCAAGAACCAATCAGGTCGTTCCCTCAGTCTCTTCTTTCCATCTCACAAGCAACAATATCCCTTAAGAGGTTGGATGAGTACATTAGAAGTAGGGAATTGGATGAAAGTTCCGTGGAGAGAGTTGAAGATAGTGGAAGTAATCTAGCTGTGGAAATAAAAGAAGGGTCTTTCTCATGGGATGATAAAGGAGAGGAGGCGACTCTGCAAGTTTCAGGGCTGGAAATAAGTAAGGGCGATCTTGCTGCAGTTGTTGGAACTGTTGGATCTGGCAAGTCTTCACTATTGGCTTCTGTGTTAGGCGAAATGCACAAGATCTCAGGACAGGTGAGATTATGTGGGAAAACAGCATATGTAGCACAGACAGCATGGATAAGGAATGCGACGATAGAAGAGAACATATTGTTTGGATTGCCGATGAATAGGGAGAAATACAGAGAAGCCATAAGAGTATGTTGCCTGGAAAAGGATCTGGAGATGTTAGAACATGGAGACCAGACAGAGATAGGAGAAAGGGGCATAAACCTCAGTGGTGGCCAGAAGCAACGCGTGCAACTTGCTAGAGCTGTGTATCAGGACTCTGACATCTATCTCCTCGACGATATCTTTAGTGCTGTTGATGCCCAAACTGGAACCTTTATCTTTAAGGAATGTGTTATGGGGGCTCTCAAGGACAAGACCGTTATCCTTGTAACCCACCAAGTTGACTTCTTGCAAAATTTTAACCTTATAGCGGTCATGCGAGATGGGAGAATCGTGCAAAGCGGAAAGTACAAAGAACTTATGGAATCTGGCTTGGATTTTAAAGCACTTGTAGCTGCTCACGAAGCCTCGATGGAGCTTGTAGACAGGACTGATGCTTCTGGTCCATCTACAAAACCTTCGGAAGAAGGGGAAAACAAAGGAAAAATGAACTCTCAAGAGGAAGACAAGTCTGAATCTAGCAATGGAACTTCAAAGCTGATAGAAGATGAGGAGAGAGAAACCGGTCGAGTCAACTTCCAAGTATATGTACAATATTTCACAGAAGCATATGGATGGTGGGGAGTAGCCCTAATCCTGCTAATGTCTCTAGTGTGGATTGTAGCTATGATGTCTGCAGACTACTGGCTGGCATTTGAAACTTCAAAAGATCGAACCTTTAATCCCACTCTGTTCATAGGTGGCTATGCTGCAATTGGGGTTGTTTCAGGTATAATGGTAATAATCAGATCATACGCAGTAACACGTTGGGGTCTAGAGACATCTCAGAGCTTCTTCAATAGAATGCTTCAAAGTATTCTCCATGCACCAATGTCATTCTTTGATACCACTCCTTCTGGCAGAATTCTTAGTCGTATGTCCACTGATCAACTCTTCGTCGATATAATAATTCCAATGTTCATGGGCTTGGTGGTGCTCTCGTACTTCTTCTTACTCAGCATCTTCATCGTCACTTGCCAAAATGCTTGGGAGGTTGTCTTCCTCATTGTTCCATTAATTTGGCTCAACAACTGGTACCGGAAATATTACCTAGCATCTTCTCGGGAATTATCTCGGCTTGAATCTATTGCAAAAGCTCCTGTGATTCATCAATTTTCAGAGACCATTTCTGGTGTCATGACAATCCGTGGCTTCGGGAAACAAAGCACATTTTGTGAAGAAAATATAAATAGGGTGAATACCAACTTGAAGATGGAATTCTGCACCTATGGATCGTATGAATGGCTCGCTTACCGATTAGACATGTTTGGAGTAGTTTTCCTTTGCGCTGCCACAGTGCTTATGATCTATTTGCCGAGTGCTATCATGAAGCCAGAATATGTTGGGTTGTCTCTATCCTATGGCCTGTCTCTGAGTGGTCTCTTGGCAATGACCGTAAGTTTGACTTGCGAAGTTGAGAACAAAATGATTTCAGTCGAGAGAATAAAGCAGTTCTCCAATATTCCACCAGAAGCTCCATGGACAATCCCTGATGGCCTTCCACCGCACAATTGGCCCACTCATGGCCATATCAAGCTGCAGGATTTGAAGGTTCGATATCGGCCAAATACACCACTAGTTCTGAAGGGAATCTCTCTAAGCATTGATGGAGGAGAGAAGATTGGGATAGTAGGGCGTACAGGGAGTGGGAAATCAACACTAGTGCAGGTGTTATTTAGGCTGGTGGAGCCTTCATCTGGGAAAATAGTGATTGATGGCATCAACATTTGCACCCTGGGACTTCATGATCTCAGGTCTCGCTTTGGTATTATTCCACAAGAGCCTGTTCTCTTTGAAGGGACTGTAAGAAGCAACATGGACCCCAATGGACTATATTCCGATGAAGAAATTTGGAAGAGCCTCGAGCGGTGCCAACTGAAGGATGTGGTGGCTGCAAAGCCCAAGAAACTGGATTCTTCAGTGGTGGATGGGGGAGACAATTGGAGTGTGGGGCAGAGGCAGCTGTTATGTTTGGGAAGGGTAATGCTGAAACGCAGCCAAATACTGTTCTTGGATGAGGCAACAGCCTCAGTTGATTCCCAAACTGATGTTGTCATACAGAAGATCATCCGGGAAGACTTCAAAAACTGTACCATTCTCAGTGTTGCTCACAGAATACCCACTGTTATGGATTGTGACAAGGTTTTAGTTGTAGATGCAGGATATGCAAAGGAATTTGATACGCCGGAGAGATTGCTGGAAAGGCCTTCACTTTTTGGCGCATTGGTCCAGGAGTACTCTAACAGATCATCTTAA 4458 0.4343 MPSPSWLTSFSCSPSPIESSSLAFFFLSPCPQRVLFSFVDLFFLLILLAFSLRKLCSRPCSYAITTSSIAKDSHYKVTFFFHFSFFLVILLAIAYVVLSILTFTQDTSLQTSWKLIEALFRGSQAITNVVVLLVMVNEKRIKDTKHPLPLRVYWAANLVISCLFAASGIYRLVNIGVANLEFDLKIDDIFSIVNLPVAVYLSLVAVKGSSGINVVKRPDLDSSSAEPLLSQRILKEENLSPYANASLLSKMMFLWMNPLLQKGYKFPLKLDDVPSLPPQFRTEKMTQLFARNWPKPEEDCKYPVGITLLRCFWKDFIFTGILAAIKLVVSFVGPVLIQEFVDYTSVKKRPDSQGFVLVLILLLAKSVECLSSHLFGFHNRKLGMLVRSSLTTSLYEKLMRLTSSARQTHGAGQIVNYMAVDAQQLHDMMMQLHNIWMTPLQVVAAMVLMYLYVGLSALAALLGAIAMFVYALLGSKKNNTFQYSIMVNRDLRMKATTDMLNNMRVIKFQAWEKHFGSKIQNFRNLEYHWIGKFMYAFSNTLGIFSTSPIMIAILTFGAAILQGYHLDSGTVFTVISMIKILQEPIRSFPQSLLSISQATISLKRLDEYIRSRELDESSVERVEDSGSNLAVEIKEGSFSWDDKGEEATLQVSGLEISKGDLAAVVGTVGSGKSSLLASVLGEMHKISGQVRLCGKTAYVAQTAWIRNATIEENILFGLPMNREKYREAIRVCCLEKDLEMLEHGDQTEIGERGINLSGGQKQRVQLARAVYQDSDIYLLDDIFSAVDAQTGTFIFKECVMGALKDKTVILVTHQVDFLQNFNLIAVMRDGRIVQSGKYKELMESGLDFKALVAAHEASMELVDRTDASGPSTKPSEEGENKGKMNSQEEDKSESSNGTSKLIEDEERETGRVNFQVYVQYFTEAYGWWGVALILLMSLVWIVAMMSADYWLAFETSKDRTFNPTLFIGGYAAIGVVSGIMVIIRSYAVTRWGLETSQSFFNRMLQSILHAPMSFFDTTPSGRILSRMSTDQLFVDIIIPMFMGLVVLSYFFLLSIFIVTCQNAWEVVFLIVPLIWLNNWYRKYYLASSRELSRLESIAKAPVIHQFSETISGVMTIRGFGKQSTFCEENINRVNTNLKMEFCTYGSYEWLAYRLDMFGVVFLCAATVLMIYLPSAIMKPEYVGLSLSYGLSLSGLLAMTVSLTCEVENKMISVERIKQFSNIPPEAPWTIPDGLPPHNWPTHGHIKLQDLKVRYRPNTPLVLKGISLSIDGGEKIGIVGRTGSGKSTLVQVLFRLVEPSSGKIVIDGINICTLGLHDLRSRFGIIPQEPVLFEGTVRSNMDPNGLYSDEEIWKSLERCQLKDVVAAKPKKLDSSVVDGGDNWSVGQRQLLCLGRVMLKRSQILFLDEATASVDSQTDVVIQKIIREDFKNCTILSVAHRIPTVMDCDKVLVVDAGYAKEFDTPERLLERPSLFGALVQEYSNRSS 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0139 1485 Pfam ABC transporter transmembrane region 317 584 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco13g0139 1485 Pfam ABC transporter transmembrane region 938 1171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco13g0139 1485 SMART AAA_5 1271 1455 IPR003593 GO:0016887
Acco13g0139 1485 SMART AAA_5 658 839 IPR003593 GO:0016887
Acco13g0139 1485 Gene3D - 626 858 IPR027417 -
Acco13g0139 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 852 IPR027417 -
Acco13g0139 1485 CDD ABC_6TM_ABCC_D2 930 1220 IPR044726 GO:0140359
Acco13g0139 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 317 597 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco13g0139 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1208 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco13g0139 1485 Pfam ABC transporter 1262 1410 IPR003439 GO:0005524
Acco13g0139 1485 CDD ABCC_MRP_domain1 631 831 - -
Acco13g0139 1485 Gene3D - 1232 1477 IPR027417 -
Acco13g0139 1485 FunFam ABC transporter C family member 5 893 1226 - -
Acco13g0139 1485 ProSitePatterns ABC transporters family signature. 756 770 IPR017871 GO:0005524|GO:0016887
Acco13g0139 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 631 854 IPR003439 GO:0005524
Acco13g0139 1485 CDD ABC_6TM_ABCC_D1 318 605 IPR044746 GO:0140359
Acco13g0139 1485 MobiDBLite consensus disorder prediction 876 904 - -
Acco13g0139 1485 Pfam ABC transporter 653 781 IPR003439 GO:0005524
Acco13g0139 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1245 1479 IPR003439 GO:0005524
Acco13g0139 1485 FunFam ABC transporter C family member 5 616 863 - -
Acco13g0139 1485 Gene3D ABC transporter type 1, transmembrane domain 305 613 IPR036640 GO:0005524|GO:0016020
Acco13g0139 1485 Gene3D ABC transporter type 1, transmembrane domain 894 1226 IPR036640 GO:0005524|GO:0016020
Acco13g0139 1485 FunFam ABC transporter C family member 10 301 613 - -
Acco13g0139 1485 MobiDBLite consensus disorder prediction 862 904 - -
Acco13g0139 1485 CDD ABCC_MRP_domain2 1243 1463 - -
Acco13g0139 1485 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 243 1481 - -
Acco13g0139 1485 FunFam ABC transporter C family member 3 1228 1479 - -
Acco13g0139 1485 SUPERFAMILY ABC transporter transmembrane region 927 1231 IPR036640 GO:0005524|GO:0016020
Acco13g0139 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1237 1478 IPR027417 -
Acco13g0139 1485 SUPERFAMILY ABC transporter transmembrane region 307 610 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0139 Acco-ChrAcco13 1082909 1089195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0139 631 847 Calmodulin-binding Proteins AT2G36910 31.602 4.52e-24 108