Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0129 ATGGGTAACGGCGACCTCAATCACAACGAAGAAGATGCCAAGAGCTACGCTCTCACCGGCAAGATTATGCTTAGCGCCATCGTCATGTTATTCTTCATCGTCATCCTAATGATTTGCCTCCACTTTTATGTTCGCTGCTGTCTTCTTCGAGCTCGTCGCCGCCAACGCCGCCGTCATCGCTCTCACCATGTATTCTACGACGACTCCGCCGCCGATCCTGCCCTGGCCACAACGCGCGGTCTTGATTCATCTCTACTCATGTCTCTACCCGTCTTTGTCTACTCTTCCAAGACCCACACCGAGCAGGTTGAATGCCCAGTATGCTTGTCCGAGTTCGAAGAGGGCGAAAAGGGTCGAGTTTTGCCCAAATGCAATCACAGTTTTCACGCTGACTGCATCGACATGTGGTTTAAGACCCACTCCACATGCCCCACTTGCAGGGCTGCTGTTGAACCCACACCGACAGACGCCAATCGGCCTGAAGTGGTGATTACTGTGATTGATGAACCGGAAATTTGTGAACCGGGGTCCACTTCTGGGCTGTGCTTAGAGTGTCAGCACGAAGGGAGGGATGAAATTCGAAGTGGCCGCACGGTTTGTTCGTCATCGTCTTCGATTGAGTTAGGGCGGAAGCCCTCGTCACTGGTGGGTGTGACCTTGGAGGTGCCCAAGAGAAGCGAGAGCTTTGGAGCTGAGTCGCCGTCGGCTCAGTCACCGTTCAGGTCGCCGATGAGTCGCATGCTGTCGTTCAAGAGGATGCTTAGCAGAGACCGGAAAGCAAACCTTTCCCCATCGGCGGGAGGCAGCGGATCTGGGAGTGAGATAGAGAAGGATGGAGGGAGAGGGAGAGGAGAGGAGACGCAATGA 867 0.5444 MGNGDLNHNEEDAKSYALTGKIMLSAIVMLFFIVILMICLHFYVRCCLLRARRRQRRRHRSHHVFYDDSAADPALATTRGLDSSLLMSLPVFVYSSKTHTEQVECPVCLSEFEEGEKGRVLPKCNHSFHADCIDMWFKTHSTCPTCRAAVEPTPTDANRPEVVITVIDEPEICEPGSTSGLCLECQHEGRDEIRSGRTVCSSSSSIELGRKPSSLVGVTLEVPKRSESFGAESPSAQSPFRSPMSRMLSFKRMLSRDRKANLSPSAGGSGSGSEIEKDGGRGRGEETQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0129 288 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 154 IPR044675 -
Acco13g0129 288 CDD RING-H2_EL5-like 104 147 - -
Acco13g0129 288 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Acco13g0129 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Acco13g0129 288 MobiDBLite consensus disorder prediction 227 288 - -
Acco13g0129 288 MobiDBLite consensus disorder prediction 230 244 - -
Acco13g0129 288 SMART ring_2 105 146 IPR001841 -
Acco13g0129 288 FunFam RING-H2 finger protein ATL3 72 152 - -
Acco13g0129 288 Pfam Ring finger domain 104 147 IPR001841 -
Acco13g0129 288 SUPERFAMILY RING/U-box 86 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0129 Acco-ChrAcco13 991866 992732 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0129 7 268 Rapid Response to Elicitors AT3G16720 47.857 1.52e-69 216