Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0127 ATGATGGGTAACGGCTACCTCAATCATAACGAAGAAGATGCCAGGCGCTGCACTCTCACTGGCAAGATCGCGCTTAGCGCCATCGTCATTTTATTCTTCATCGCCTGCATCCTAATGATTTGCCTCCGCATATATGTTCGCTGCTTTCATCGCTCTCACCTTGTATTCTACGACGACCCTGCCGTCGCTCCTGTACTGGTCTCAAGGCGCCGTCTTGATTCATCTCTACTCATGTCTCTCCCTGTCTTTGTCTACTCTTCCAAGACCCACACCGAGCAGGTTGAATGCCCAGTATGCTTGTCCGAGTTCGAAGAGGGCGAAACGGGTCGAGTTTTGCCACAATGCAATCACAGTTTTCACGCTGACTGCATCAACACGTGGTTTAAGACCCACTCCACATGTCCCACTTGCAGGGCTGTTGTTGAACCCGCACCGGCAGACGCCAATCGGCCTGAAGTGGTGATTACTGTGAGTGATGAACCGGAAATTCGTGAACCGGGGTCCACTTCTGGGCTGTGCTCGGAGTGA 528 0.5227 MMGNGYLNHNEEDARRCTLTGKIALSAIVILFFIACILMICLRIYVRCFHRSHLVFYDDPAVAPVLVSRRRLDSSLLMSLPVFVYSSKTHTEQVECPVCLSEFEEGETGRVLPQCNHSFHADCINTWFKTHSTCPTCRAVVEPAPADANRPEVVITVSDEPEIREPGSTSGLCSE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0127 175 FunFam E3 ubiquitin-protein ligase ATL6 62 144 - -
Acco13g0127 175 SUPERFAMILY RING/U-box 76 146 - -
Acco13g0127 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 144 IPR013083 -
Acco13g0127 175 Pfam Ring finger domain 95 138 IPR001841 -
Acco13g0127 175 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Acco13g0127 175 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 23 142 IPR044675 -
Acco13g0127 175 CDD RING-H2_EL5-like 95 138 - -
Acco13g0127 175 SMART ring_2 96 137 IPR001841 -
Acco13g0127 175 SMART FANCL_C_2 92 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0127 Acco-ChrAcco13 987738 988265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0127 8 175 Rapid Response to Elicitors AT3G16720 45.026 1.97e-46 152