Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0120 ATGGGTCTTCTCAGGGTTCGGATCAAGCGCGGAGTGAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCTTACGTCGTCGTAAAGATGGGCACACAGAAACTCAAGACTCGGGTGATAAAGAAATGCGTGAATCCAGAGTGGAACGAAGATCTGACGATTGCAGCGACAGAGCCAGATCATCCTATAAAATTGACGGTGTACGACCATGACACGTTTAGCAAAGATGACAAGATGGGGGATGCAGAGTTTGAGATAAAGTCGTTTACAGAAGCGGCGAATATGAGGCTGGAAGGGCTGCCGAATGGGACGGTGGTGAGAAGGGTGCATCCAGACAGGCAAAACTGTTTGGCGGATGAGAGTTGCATTACGTACAGAGAAGGCAGGATTGTGCAGGATTTGGTGCTCAGATTGCGCAACGTTGAATGTGGTGAGATTGAAGTCCAATTGGAATGGATCTGA 462 0.4935 MGLLRVRIKRGVNLAVRDVRSSDPYVVVKMGTQKLKTRVIKKCVNPEWNEDLTIAATEPDHPIKLTVYDHDTFSKDDKMGDAEFEIKSFTEAANMRLEGLPNGTVVRRVHPDRQNCLADESCITYREGRIVQDLVLRLRNVECGEIEVQLEWI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0120 153 CDD C2_ArfGAP 2 144 - -
Acco13g0120 153 Gene3D C2 domain 1 153 IPR035892 -
Acco13g0120 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 119 IPR035892 -
Acco13g0120 153 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 153 IPR044562 -
Acco13g0120 153 ProSiteProfiles C2 domain profile. 1 99 IPR000008 -
Acco13g0120 153 Pfam C2 domain 2 92 IPR000008 -
Acco13g0120 153 SMART C2_3c 3 98 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0120 Acco-ChrAcco13 932802 933665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0120 34 152 C2H2 Transcription Factor Family AT1G70790 55.372 8.40e-46 145