Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0112 ATGAGTGTGTCGGAAAAGCGGCATTTTATCACAAAGGACAAACAAACATGTAGTAATAGCATCGGTGTACAACGCAATGATTTTTTCAACCTTCTCATTCAACATTCCAAATCAGATCACTCCCCAAATTTCACTTCAGCCTTCTATGGGACCGAGAAATCCTTCTCTCCTTCAACCCTGCCAAAGAAAGATGCTTTCCCCCCTTCTCAATATGTGACCTCAAGATTTTTTGTTTTCTGCTTCATAAAGTTAAAAGAAAACTGTTCACTTAGGATCCAAGCATCTGGATCACTTTCTTTAGCATTCGGCACTGTAGCTGATCGAAGAGATATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAATCGATCAGAAGATGCAGCAGGATCTACTTCTTCAAAAGGCCACAAGTCCAATGATGGTTCATTCCCTAAGAAGCAAAGTTCTGAGCATAAACCCTTTCCAGGGATTTCGGGCTGGTTGCACTCTGTTGCTAACAGGCAGAGTCCAAGTCCTCCATCTTCGAATCTGAAAAGAGGAGAAAGAGTGGAACCATCTGATTTAGTTAGCAGTGGCGGTGTAGATATTGTTTTGGATTCAACTAGGCGTGATTCTGGGTCTAGCAATTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCAGAGGCAGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGCTCTTGTGGCCCTGATAATACACCAGCTGAAGTTGTGGCCTACAGATACTGGAATCACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGTCTCAGTCAAACTCTGCTAGAATGCCTTCCCTGGTAGATCTGCAAGGGACACCAATCTCAGATGGTGTCACTTGGGAAGCAGTCTTGGTCAATAGGGCCGCTGATTCAAATTTGTTGAAACTTGAGCAAAAAGCCCTAGAGTTGGCTGTCAAGTCAAGACCAAATTCTGAGTTAATTATAAATAGGAATTTGGTGCAGAGGCTTGCCATATTAGTGGCTGACTATATGGGTGGACCAGTTACAGATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTAACCATTGGATTGGCTCGGCATCGTGCATTGTTTTTTAAGGTTTTATGTGATAGTGTGGGCATCCCATGCTGCTTGGTTAAAGGACTACATTATACAGGTTCAGATAATGTGGCCATGAACTTTGTCAAAATTGACGATGCAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGGATCGCATAGCGAGTATGATGAATCTTTTTTTGTGACCAGTCCTTTATCGAGGGACCTTTATTCCTCTCGCGTAGCGTCATCCAGCAGTGGGATAGGAAGTTCATCTGAAGAAGCTTCAGACTTGAGTACATTTGATAAAAGAAGCATATCAAAACAGATTGCTTATTTGGGCAAAGAATCTTATGTAAGCAATCCCACTACAAGTGAAGACGAATCAAAGAGCCCATTGAATGATTTCGGATGTCCCCCTAATGTGGAAATGTTCACCATGCAGGAAGCTCCTGGTAGACCAAATCATCCCTACGTTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTGGAATGAAAGTGAAAGATGTTTCACAATATATGATTGATGCTGCAAAGGGGAATCCTCAGTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGCTCCTCCTCCAAACTTATTTTCTGAAACTTATCATCAGCAGTTCGGTGCTACCATTGTTGAGACTAACTCCAACATTGAGGAAAATGAATGTGAACATGAGAGTGGGAAAAAGGAAACTCAGGCTGATTGCCACCGAAGTCCTGCTCAATTCTTGCCTCCTTTGCCTCCTTACAGAGCTCATCATAAAGCAATTCCGAGCAGTCAGATGGAGCATTCCAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATCCTAGGGAAGCAGCTGGACAGCACTTGCAATCACATGCAGAAGCAACTCCTATAAGATTCGGGAAAAATGTACCAGTTGCTGCTGCCGCAGCAGCCGCAGCAGCTGTTGTTGCTTCCTCAGTGGTAGTTGCTGTGGCAAAGTCAAGTACTGACTCAAATATTGAGCTTCCCGTTGCGGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCGGCTGTTAGTAAACAATATGACCAGGGAAGTCGAAGTGATGGAGATTCGGATGGTGCTTTTTATGAGCAGAAGGGTAGTGATCATGGGGAACATAATGTTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACAGATCAATAAGTAATGATAGTGCAAAATCTGATTCTGTACTAGATGATGTTGCTGAGTATGAAATTCCATGGGAGGATATCACACTGGGTGAACGTATTGGGCTTGGATCATATGGGGAGGTGTACAGGGGTGAATGGCATGGGACTGAAGTAGCTGTAAAGAGATTTTTGGATCAAGACATCACTGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTTAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACCAAACCTCCAAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGGCTGAGGATGGCGCTAGATACTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGCGACTTTGGTTTATCACGTATGAAGCACAGTACATTCCTCTCTTCAAGATCAACCGCTGGAACAGCAGAGTGGATGGCTCCAGAAATGTTGAGAAATGAGCCTTCAAATGAAAAGTGTGACGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACGATGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTGGTTGGTGCCGTCGGTTTCCAACATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATTGCTGATATTATCAGAAAATGCTGGCAGACAGATCCAAGGTTGAGACCAAGCTTTGCCGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATTATTAATTCACAAGTGCAAAGATCAAGTGGAGCACATGAAAAGGCTCAGGCATCACGAATTGCACAAGACCCAGCTGGATAG 3417 0.4343 MSVSEKRHFITKDKQTCSNSIGVQRNDFFNLLIQHSKSDHSPNFTSAFYGTEKSFSPSTLPKKDAFPPSQYVTSRFFVFCFIKLKENCSLRIQASGSLSLAFGTVADRRDMKNILKKLHIMSNRSEDAAGSTSSKGHKSNDGSFPKKQSSEHKPFPGISGWLHSVANRQSPSPPSSNLKRGERVEPSDLVSSGGVDIVLDSTRRDSGSSNSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNHNALGYDDKILDGFYDLYGILNESQSNSARMPSLVDLQGTPISDGVTWEAVLVNRAADSNLLKLEQKALELAVKSRPNSELIINRNLVQRLAILVADYMGGPVTDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALFFKVLCDSVGIPCCLVKGLHYTGSDNVAMNFVKIDDAREYIVDLMADPGTLIPSDATGSHSEYDESFFVTSPLSRDLYSSRVASSSSGIGSSSEEASDLSTFDKRSISKQIAYLGKESYVSNPTTSEDESKSPLNDFGCPPNVEMFTMQEAPGRPNHPYVHARSPSWTEGISSPAVRGMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVAPPPNLFSETYHQQFGATIVETNSNIEENECEHESGKKETQADCHRSPAQFLPPLPPYRAHHKAIPSSQMEHSKPVEGLGINLPFDPREAAGQHLQSHAEATPIRFGKNVPVAAAAAAAAAVVASSVVVAVAKSSTDSNIELPVAAAATATAAAVVATTAAVSKQYDQGSRSDGDSDGAFYEQKGSDHGEHNVLGANSEGERISDRSISNDSAKSDSVLDDVAEYEIPWEDITLGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDITGESLEEFISEVRIMKRLRHPNVVLFMGAVTKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPIINSQVQRSSGAHEKAQASRIAQDPAG 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0112 1138 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 217 236 IPR003903 -
Acco13g0112 1138 FunFam Serine/threonine-protein kinase CTR1 932 1115 - -
Acco13g0112 1138 SUPERFAMILY Protein kinase-like (PK-like) 836 1104 IPR011009 -
Acco13g0112 1138 FunFam Serine/threonine-protein kinase isoform 1 844 931 - -
Acco13g0112 1138 ProSitePatterns Protein kinases ATP-binding region signature. 859 880 IPR017441 GO:0005524
Acco13g0112 1138 PRINTS Tyrosine kinase catalytic domain signature 1032 1054 IPR001245 GO:0004672|GO:0006468
Acco13g0112 1138 PRINTS Tyrosine kinase catalytic domain signature 966 984 IPR001245 GO:0004672|GO:0006468
Acco13g0112 1138 PRINTS Tyrosine kinase catalytic domain signature 1013 1023 IPR001245 GO:0004672|GO:0006468
Acco13g0112 1138 PRINTS Tyrosine kinase catalytic domain signature 1076 1098 IPR001245 GO:0004672|GO:0006468
Acco13g0112 1138 PRINTS Tyrosine kinase catalytic domain signature 927 940 IPR001245 GO:0004672|GO:0006468
Acco13g0112 1138 SMART serkin_6 853 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0112 1138 Pfam Protein tyrosine and serine/threonine kinase 853 1105 IPR001245 GO:0004672|GO:0006468
Acco13g0112 1138 ProSiteProfiles Protein kinase domain profile. 853 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0112 1138 Gene3D Transferase(Phosphotransferase) domain 1 932 1117 - -
Acco13g0112 1138 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 506 1114 - -
Acco13g0112 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 972 984 IPR008271 GO:0004672|GO:0006468
Acco13g0112 1138 CDD STKc_MAP3K-like 859 1105 - -
Acco13g0112 1138 MobiDBLite consensus disorder prediction 163 177 - -
Acco13g0112 1138 MobiDBLite consensus disorder prediction 785 834 - -
Acco13g0112 1138 Gene3D Phosphorylase Kinase; domain 1 846 930 - -
Acco13g0112 1138 MobiDBLite consensus disorder prediction 125 139 - -
Acco13g0112 1138 MobiDBLite consensus disorder prediction 1115 1138 - -
Acco13g0112 1138 Pfam Ethylene-responsive protein kinase Le-CTR1 257 462 - -
Acco13g0112 1138 MobiDBLite consensus disorder prediction 124 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0112 Acco-ChrAcco13 859159 866929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0112 108 1119 MAP Kinase Kinase Kinase AT1G73660 63.143 0.0 1171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco13g0112 PK_Tyr_Ser-Thr 5e-68 CL0016