Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0110 ATGATATTTACAGTTTACCGCTTATTTGAAGAAACAGAATTTTTCACCGAATATGGAGAGGCAAGCAGATACCAGGTCCAAGAGGTCATTGGTAAAGGAAGTTATGGCGTTGTGGGTTCTGCCATTGACACTAATACTGGTGAGAAGGTTGCAATAAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACGAGGATCCTTAGAGAAATTAAGCTCCTTAGATTGCTCAAACATCCTGATATAGTGGAAATTAAGCATATCATGCTTCCTCCTTCTCGACGAGAGTTTAGGGATATCTATGTCGTGTTTGAGCTGATGGAATCTGATCTTCATCAAGTAATAAAGGCAAATGATGATCTTACTCCGGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGGGGACTGAAATATATACATGCTGCTAATGTATTTCACCGTGACTTAAAGCCGAAAAATGTTCTTGCTAATGCCGATTGCAAACTAAAGATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAACAATATTCTGGACGGACTATGTTGCAACCCGGTGGTATCGCGCACCTGAACTATGTGGTTCATTTTTCTCAAAATATACCGCTGCAATTGATATTTGGAGCATTGGATGCATTTTTGCAGAAATTCTCTTGGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTCAACCAGTTGGATCTCATAACTGATTTACTTGGGACTCCTCCTCCTGAATCCATTGCGAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTGGCATGCGTAAAAAGAAACCAGTTCCATTTTCCCAAAAGTTCCCTACTGCTGATCCTTTGGCTCTTCGTTTGCTGCTGCGCCTGCTTGCATTTGATCCTAAGGATCGTCCAACTGCTGAAGAGGCTTTATCTGATCCTTACTTGAGAGGGCTATCGAACGTGGATTGTGAACCATCTACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGAAAATTGACTAAAGATGACGTTAGAGAGTTGATTTATCGGGAGATTCTGGAGTATCATCCGCAGATGCTTGAGGAATATCTTAGTGGCGGAGAGCAGACCAGTTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAAGAGCATTATGGCAATGGTGAGAGGGGCATTCCATTGCTGAGACAGCAGGCATCCTTGCCTCGAGAGCGAGTTAGTGGAGGCAAGGATGAAAAGAATGAAGGGGGGGATTTAGAAAAGCGTGCGGCAGCTGGTGTTGAAACAAGTGTTGAGGGTGCTTCGAGGTCTAATGGGACAGACGCTGATTCTCAAAATGGTCTCTCCAATGCCATTAATACGCGTAGCTTGTTCAAGAGTGCCAGCATTAGTGCATCCAAGTGCATAGGTGTGAAACCACACGACAATCTCAAGGAGAAGCCAATTGAGGAGTTGAGTGATGAGTTGACAGAGAAGATGGATGTCCTCAATTAA 1524 0.4285 MIFTVYRLFEETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTNTGEKVAIKKINDVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHAANVFHRDLKPKNVLANADCKLKICDFGLARVSFNDAPSTIFWTDYVATRWYRAPELCGSFFSKYTAAIDIWSIGCIFAEILLGKPLFPGKNVVNQLDLITDLLGTPPPESIARIRNEKARRYLSGMRKKKPVPFSQKFPTADPLALRLLLRLLAFDPKDRPTAEEALSDPYLRGLSNVDCEPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLEEYLSGGEQTSFMYPSGVDRFKRQFAHLEEHYGNGERGIPLLRQQASLPRERVSGGKDEKNEGGDLEKRAAAGVETSVEGASRSNGTDADSQNGLSNAINTRSLFKSASISASKCIGVKPHDNLKEKPIEELSDELTEKMDVLN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0110 507 SMART serkin_6 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0110 507 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Acco13g0110 507 FunFam Mitogen-activated protein kinase 11 118 - -
Acco13g0110 507 Pfam Protein kinase domain 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0110 507 MobiDBLite consensus disorder prediction 399 458 - -
Acco13g0110 507 CDD STKc_TDY_MAPK 23 360 - -
Acco13g0110 507 MobiDBLite consensus disorder prediction 441 458 - -
Acco13g0110 507 SUPERFAMILY Protein kinase-like (PK-like) 19 320 IPR011009 -
Acco13g0110 507 ProSiteProfiles Protein kinase domain profile. 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0110 507 Gene3D Transferase(Phosphotransferase) domain 1 110 338 - -
Acco13g0110 507 MobiDBLite consensus disorder prediction 415 432 - -
Acco13g0110 507 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 365 - -
Acco13g0110 507 ProSitePatterns Protein kinases ATP-binding region signature. 30 54 IPR017441 GO:0005524
Acco13g0110 507 FunFam Mitogen-activated protein kinase 110 338 - -
Acco13g0110 507 FunFam Mitogen-activated protein kinase 339 361 - -
Acco13g0110 507 ProSitePatterns MAP kinase signature. 59 162 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0110 Acco-ChrAcco13 845494 849241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0110 11 485 MAP Kinase Gene Family AT3G18040 81.971 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco13g0110 Pkinase 5e-66 CL0016