Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0091 ATGGATTCACCAACCCCCTCAGTGCACACTCCTTGTCGTCGTCCCAATGTTTCCAAGTCTCGTGCTCATCATCCCGAAGAAAAGGTCCGCCTTATGTGCAGCTATGGCGGACGAATCGTCCCCCGCCCACATGACAAATGCCTCTGCTATCTCGGCGGCGACACCCGCATCATAGTGGTCCACCGCCATTCTTCCCTCAGAGAACTCTGTCTCCTTCTCTCCGGGACCCTCCTCCTCCATAGCCGACCTTTCATCCTCAAGTATCTTCTTCCCGGTCAAGACCTTGACAGTCTCATATCAATAATCCACGATGAAGACCTCCAACTCATGATCCAAGAGTATGATCGCGTAGTAACTTCATCCTCTCCTCACAAAACTTCGCGTCTGAGGCTGTTTTTGTTCTTCTGTAATCAGCCAGAGACTGCTATTCCAATCCGTTCCCATGACGCCAAGCAAGAGACAAGGTTCGTGGACGCTATTAATGACTCTAGGATTCTCTCTCGGTTTGTGTTAGATGCTTCTGCCGTTGATCGCTCAGCGAAACCTGGCGGACCTCCTCTGAATGAGTATGACCATAATTTGAAGGCTTTGGCTGTGATTCAAAACAATAAAAAGATCAAGAGTTTGGCTGATGTGGCGGATATATCGCCTTCTGGGTCTGTTTCTTCGTCGCCCTCCATGTTTAGCCTGCCTTCACTCGGGGACGATGATAATAGCAGCCGACTGAAGCGGCAACAGTGCCAGATGGAGGAATTGAACTTTGCTACGACAGATGGGTGTGCCGTTTCCTCTGCTGATTTGGCACCACCATTGATGGTCACTACTGGCCATAACATGAATGGGGTTACTTGTGATGCACTGGCTTCAGAATTAACTCCTTCTCCGTTGCAGCTTGTGCGTGCAAGAGCAAGCGACGCTTTAAGTTTTCTTTCTCCCAATTCAGTTACCAGTTATATAGTGGCTACTTACTTCTTTCTTTATTTGTCACAGCCTGTTCACTTGCAAGAGCAAGCAAATATGAGGAGTGAAATATCTTATGCCAGCCCTCCAATCCAAAGGGATAAATTTGAAGAAAGTGGATACAGGTTAGCTACACAAGTGGATCAAAATCAAGAAATCGAGCAATTTGTCCAGTGCGTGCAGCAGGTTGCACTCCCATGCAACTACCCAGTTTATGCAATACTTCCAGTGGTGGCTACTCATCCAACCGGGGCTTCCTCAGGGAAGCCGCTACTTACATTAACACCCCAAATCGGAACTGCTGCTTCAACAATTTACAACAATGCCACTCCAATTGTTAACGCAGCATCAAATCCTGCATTTCTTCAGACTGCTCAATTTCACCAACACGACCATGTGGATTTCCCTCAATTCCATTATTGCCCGCTACAGTCTAATCTTGCTTTTGTTCCATCTCCTCATGGTTTTGAACATCAGAGCACTGCCAATGTCCAAAAACAAACCAACACACCTCTGTCTCCTCACGATCAATCCATGACCCCCAAGATCGTCGGAGCTTTAAAGCATAACATTTGGTAG 1539 0.4737 MDSPTPSVHTPCRRPNVSKSRAHHPEEKVRLMCSYGGRIVPRPHDKCLCYLGGDTRIIVVHRHSSLRELCLLLSGTLLLHSRPFILKYLLPGQDLDSLISIIHDEDLQLMIQEYDRVVTSSSPHKTSRLRLFLFFCNQPETAIPIRSHDAKQETRFVDAINDSRILSRFVLDASAVDRSAKPGGPPLNEYDHNLKALAVIQNNKKIKSLADVADISPSGSVSSSPSMFSLPSLGDDDNSSRLKRQQCQMEELNFATTDGCAVSSADLAPPLMVTTGHNMNGVTCDALASELTPSPLQLVRARASDALSFLSPNSVTSYIVATYFFLYLSQPVHLQEQANMRSEISYASPPIQRDKFEESGYRLATQVDQNQEIEQFVQCVQQVALPCNYPVYAILPVVATHPTGASSGKPLLTLTPQIGTAASTIYNNATPIVNAASNPAFLQTAQFHQHDHVDFPQFHYCPLQSNLAFVPSPHGFEHQSTANVQKQTNTPLSPHDQSMTPKIVGALKHNIW 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0091 512 MobiDBLite consensus disorder prediction 217 240 - -
Acco13g0091 512 Pfam PB1 domain 48 134 IPR000270 GO:0005515
Acco13g0091 512 CDD PB1_UP2 32 134 - -
Acco13g0091 512 SUPERFAMILY CAD & PB1 domains 44 138 - -
Acco13g0091 512 PANTHER OS05G0427100 PROTEIN-RELATED 19 406 - -
Acco13g0091 512 SMART PB1_new 43 134 IPR000270 GO:0005515
Acco13g0091 512 MobiDBLite consensus disorder prediction 478 499 - -
Acco13g0091 512 MobiDBLite consensus disorder prediction 1 23 - -
Acco13g0091 512 MobiDBLite consensus disorder prediction 217 236 - -
Acco13g0091 512 MobiDBLite consensus disorder prediction 478 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0091 Acco-ChrAcco13 717193 718863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0091 28 180 MAP Kinase Kinase Kinase AT1G16270 37.013 3.77e-24 105