Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0084 ATGCCGCTCTTCTCCTTTATATCTCGGTGTTTCGTCCCCAGTGTAAGTGAAAACGAAGCTTCGACCCCTAAGAATTGCGAGGCGAAGGGTCATCAGATAGTGAGTGCGAGTGTTGAGACAACAAGCAGCCGTGGCAGCCCCGTCCAATCAGTGCCTGTGGTTTCTGGAGCACCGATCAGCCATGTTCGATCTGAGGTAATGAGCAGCCCCGACAACAGGAGTAAAATTTTCAAATATTCCGAACTTAAAATAGCAACCGACAATTTTGACTCCGAGAGAAAGCTTGGGAGAGGAAAACATGGGACAGTATACCATGTCACGAGACAGTTTGTTTGTTCTAAGCTGTTGATAGTCTGGTTTCTTTATTATGACAAGTTAGCCAAGTATAAAGATGGATTGGATAATGTTATACTTCGTTGTTTTCCCCTCAATATCATAGGAATTCTCGAAGATGGGCATGATGTCGCAATAAAGAAGTTACGTGAAGACCAGTTAAAAGCCCTGTGGCTACATGATGAGAAACCCCACAGCGAGCAAGTGGAAAAGTTCACGAGTGAAGTTTCATTGTTAACGTCTGTGAGCCATGAAAACCTTGTTCGACTGTACGGCTGCAGCTCTTCTCAAAGCAGTGAACTACTTCTAGTGCAAGAATACATGTCCAAAGGAGATCTTACTAAATGTTTTGTTACCCATATCACAACTGATCCTGCGGGGCCTTTTGCTTATATTGATCCAGAGTATTATGAGCGTTGCCATCTTTCTTATAAGAGTGATGTATATAGTTATGGAGTGGTGCTGATTGAGCTGATATCATCCCTGCCAGCATCCAGTCTGGATGATGAACATCGCCTTTACGATTATTATAACGAACATCGCCTTTCCGATTATGCGGTCAGTAAAATCCGAGGCAGACAACTTGCAAGCCTTGTGGATCCTGCTCTTGGATTTGAATCAGATGACTGGATAACTCGAACAATTAGTGCAGTGGCAGAGTTGGCATGTACCTGTTTGCAACGCCGCAGTGACAGGAGACCTTCCATGGCTGAAGTGTTGGATAGGCTAAACAGCATTAAAAGTACGAGGACTGGAAGTTCTCTTTCTTTGTCTGCAAATAGTTTGTAA 1122 0.4385 MPLFSFISRCFVPSVSENEASTPKNCEAKGHQIVSASVETTSSRGSPVQSVPVVSGAPISHVRSEVMSSPDNRSKIFKYSELKIATDNFDSERKLGRGKHGTVYHVTRQFVCSKLLIVWFLYYDKLAKYKDGLDNVILRCFPLNIIGILEDGHDVAIKKLREDQLKALWLHDEKPHSEQVEKFTSEVSLLTSVSHENLVRLYGCSSSQSSELLLVQEYMSKGDLTKCFVTHITTDPAGPFAYIDPEYYERCHLSYKSDVYSYGVVLIELISSLPASSLDDEHRLYDYYNEHRLSDYAVSKIRGRQLASLVDPALGFESDDWITRTISAVAELACTCLQRRSDRRPSMAEVLDRLNSIKSTRTGSSLSLSANSL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0084 373 SUPERFAMILY Protein kinase-like (PK-like) 63 354 IPR011009 -
Acco13g0084 373 Gene3D Transferase(Phosphotransferase) domain 1 213 369 - -
Acco13g0084 373 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 229 361 IPR044652 GO:0004672
Acco13g0084 373 Gene3D Phosphorylase Kinase; domain 1 74 116 - -
Acco13g0084 373 Gene3D Phosphorylase Kinase; domain 1 146 212 - -
Acco13g0084 373 ProSiteProfiles Protein kinase domain profile. 89 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0084 373 Pfam Protein tyrosine and serine/threonine kinase 172 228 IPR001245 GO:0004672|GO:0006468
Acco13g0084 373 Pfam Protein tyrosine and serine/threonine kinase 237 293 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0084 Acco-ChrAcco13 689061 690975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0084 76 359 Receptor kinase-like Gene Family AT1G25390 30.097 8.50e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco13g0084 PK_Tyr_Ser-Thr 2e-06 CL0016