Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0083 ATGCCGATCTTCTCCTTTATATCTCAATGTTTCGTCCCCAGTGTAAGTGAAAACGATGCTTCGACCCCTAAGAATCGTGAGGTGAAGGGTGATCAGAAGGTGAGTGTGAATGTTGAGGCAACAAGCAGCCGTTGCAGCCCGGTCCAATCAGTGCCTGTGGTTTCTGGAGCACCGATCAGCCATGCTCGATCTGAGGTAATGAGCAGCCCCGACAACAGAAGTAAAATTTTCAAATATTCTGAACTTAAAATAGCAACCGACAATTTTGACTCCGAGAGGAAGCTTGGGAGAGGAAAACATGGGACAGTATACCTTGGAATTCTCAAAGATGGGCATTCTGTCGCAATAAAGCAGTTACATGAAGAAAAGTTAAAAGCCCTGAGGCTACATGATGAGAAACTCCACAACGAGAAAGTGGAAAAGTTCATGAGTGAAGTTTCATTGTTAACGTCTGTGAGCCACGAAAACCTTGTTCGACTTTATGGCTGCATCACTTCTCAAAGCAGCGAATTACTTCTAGTGCAAGAATACATGCCCAAAGGAGATCTTACTAGATGTCTTCATGATTCCCTGCAGCAACCCGGTTCACTCCCTTGGAGTATCCGGTTAAATATCGCAATACAAACAGCAAGTGCATTGGCGTACCTCCATTCTCTTAATATAATACATCGTGATGTGAAAACCAGCAATATTCTGCTTGACCACAGTTTCACTGCTAAAGTTGCTGACTATGGATTGGCACATTTTTTCCCACTAGGTCTTGTTACCCATATCACAACTGATCCTGAGGGGACTCCTGGTTATATTGATCCAGAGTATTTTGAGCGTTGCCATCTTTCTGATAAGAGTGATGTATATAGCTATGGAGTGGTGCTGATTGAGCTGATATCATCCCTGCCAGCATTTGGTTTGGACGATGAACATCCCTGCCTTTCTGATGATGCCGTCCGTAATATCCAAGGCGGACAACTTGGAAGCCTTGTAGATCCTGCTCTTGGATTTGGATCAGATGACTGGATAACTCGAACAATTAGTGCAGTGGCAGAGTTGGCATGTAGCTGTTTGCAACTCCACAGAGACAGGAGACCTTCCATGGCTGAAGTGTTGGATAGGCTTAAGAGCATTAAAAGTGCGAGAACTGGAAGTTCTCTTTCCTGGTCTCCAAATAGTTTGTGA 1176 0.443 MPIFSFISQCFVPSVSENDASTPKNREVKGDQKVSVNVEATSSRCSPVQSVPVVSGAPISHARSEVMSSPDNRSKIFKYSELKIATDNFDSERKLGRGKHGTVYLGILKDGHSVAIKQLHEEKLKALRLHDEKLHNEKVEKFMSEVSLLTSVSHENLVRLYGCITSQSSELLLVQEYMPKGDLTRCLHDSLQQPGSLPWSIRLNIAIQTASALAYLHSLNIIHRDVKTSNILLDHSFTAKVADYGLAHFFPLGLVTHITTDPEGTPGYIDPEYFERCHLSDKSDVYSYGVVLIELISSLPAFGLDDEHPCLSDDAVRNIQGGQLGSLVDPALGFGSDDWITRTISAVAELACSCLQLHRDRRPSMAEVLDRLKSIKSARTGSSLSWSPNSL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0083 391 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 49 379 IPR044652 GO:0004672
Acco13g0083 391 ProSiteProfiles Protein kinase domain profile. 89 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0083 391 SUPERFAMILY Protein kinase-like (PK-like) 67 372 IPR011009 -
Acco13g0083 391 SMART serkin_6 89 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0083 391 Gene3D Transferase(Phosphotransferase) domain 1 178 385 - -
Acco13g0083 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Acco13g0083 391 PIRSF ILK 30 388 - -
Acco13g0083 391 Pfam Protein kinase domain 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0083 391 Gene3D Phosphorylase Kinase; domain 1 60 177 - -
Acco13g0083 391 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0083 Acco-ChrAcco13 680145 682032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0083 76 377 Receptor kinase-like Gene Family AT1G25390 48.197 1.29e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco13g0083 Pkinase 1.2e-47 CL0016