Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0082 ATGGCCATGGACGTCCAGTTGCATTCTTATGCTTTCTTCCTTCCATGCATAATATTCACCATCTCCTTCTTCTCAGCAGAATCACACAGGCACGGCGAAGCCACCAATTACTCTCTGTGTAATCAAGCTTACAATTGTGGAAATATCAGCAACATCGCTTACCCTTTCTGGGGACAGAATCGACCTCTTTATTGTGGCGGTGGCTATCAATTCAAGCTCACTTGCTGGAATAATACGACTTCCATCACAGTACGCCGACAGGATTTCATGGTGGTTTCCATTAACCCAGAATTTCAATCCATGAGATTGGTACAAACTGCTCTCTCTGTTTCTTGTCCATGGAACTTCACCAACACTTCGTTGGACCCTGCTCGCTTCCGCTACGATAACTTAACAATTCAGAGCTTGCAAGATGAGACAAAGAAATTGCAAAATTTTTCTGAATGCAAGGCTCATAATCAAATTCTACTACAAGGTGAGATTCCCGAAGTTGAAGACGAGGGTGGGTTGAACAAATCTGTGAGGAACGGGTTCGTAGTTCAATATATGGAAAAGGAAAACTGGTTTCACTGCCTGGCATGCAATTCATCGGGAGGAATATGTGGGACTGACATCCATGACGCTTCCCGATTTGCCTGTAATTGCGGGAACAGAGTTCGTCCTTATTCTTGTCCAAAAAACAGACATTGGAACTGGAAAGGGAAACTCATAGCAGGTGCTGCTGCTTCTTCATTCAGTGTGATCGTTATGAGTACTGGCTTTTATTTCTATCTCCGCCGAAAGAAGAATCGTCATGCCAAATCAGACAAACAATCTCATCAGAGTCGGACCATATCTTCTGATTTCTCTATAGACGATGCTGAGAATAAAGAAAGTAAATACTTTGGAGTCCACCTCTTCTCATATTCCGAACTTGAACAGGCCACTAACAATTTTGATTCTACCAATGAACTTGGAGATGGGGGTTTCGGAACAGTTTATCGGGGAAAACTGGGGGATGGTCGTACAGTTGCAGTGAAGAGATTGTATGAAAACAACGGCAAGAGAGTTGAGCAGTTCATGAATGAAGTGGAGCTCTTAACTCGTCTGCGCCACCTAAACCTTGTCCAACTTTATGGCTGCACCTCTCGCCATAGCCGTGAACTTCTGCTTGTATATGAATACGTTCCTAACGGAACCGTCGCCGATCATCTTCACGGCCAAAGAGCAAAACCAGCAGACACAGTAATCCCCTGGCACACCAGAATGAACATAGCCATAGAGACTGCAAGTGCACTGGCATATCTTCACTCATCTGACATCATCCACCGCGACATAAAAACCACCAACATCCTTCTTGACGATCATTTCGTTGTCAAAGTAGCAGATTTTGGACTCTGTCGTCTCTTTCCAAATGATGTCACTCACATTTCAACTGCCCCACAGGGAACCCCTGGATACGTGGATCCAGAGTACCATCAATGTTACCAGCTTACTGATAAGAGTGATGTGTATAGTTTTGGAGTGGTGCTCATTGAGCTGATATCATCAATGCCTGCTATTGACATCACGAGGCATAGGCATGAGGTAAATTTGGCGACCATGGCTATTAACAAGATACAGAGTGGGGATTTGCATGAGCTTGTGGACCCAACTCTTGGGTTTGAAGAAGATGACAGAGTGAGGAAGATGATAAATGGAGTGGCAGAGTTGGCATTCCAGTGCTTGCAGGGTATGAAAGAGACGAGGCCGTCCATGGAAGAGGTGGTGGAGAGGTTGAAGGAAATACAGAGAGATGGGATAGGCAAAACAAAAGAAGAGGAGGTGGAAATGGAAACGGCGTCAGTAGATCATGTGGTGTTGCTCAAGAATGAAGTGCCTCCGCTCTCACCTGATTCAAATATGAGGAGCACAGGGACGACCCCAAATGCCAGCGGATAA 1920 0.4505 MAMDVQLHSYAFFLPCIIFTISFFSAESHRHGEATNYSLCNQAYNCGNISNIAYPFWGQNRPLYCGGGYQFKLTCWNNTTSITVRRQDFMVVSINPEFQSMRLVQTALSVSCPWNFTNTSLDPARFRYDNLTIQSLQDETKKLQNFSECKAHNQILLQGEIPEVEDEGGLNKSVRNGFVVQYMEKENWFHCLACNSSGGICGTDIHDASRFACNCGNRVRPYSCPKNRHWNWKGKLIAGAAASSFSVIVMSTGFYFYLRRKKNRHAKSDKQSHQSRTISSDFSIDDAENKESKYFGVHLFSYSELEQATNNFDSTNELGDGGFGTVYRGKLGDGRTVAVKRLYENNGKRVEQFMNEVELLTRLRHLNLVQLYGCTSRHSRELLLVYEYVPNGTVADHLHGQRAKPADTVIPWHTRMNIAIETASALAYLHSSDIIHRDIKTTNILLDDHFVVKVADFGLCRLFPNDVTHISTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAIDITRHRHEVNLATMAINKIQSGDLHELVDPTLGFEEDDRVRKMINGVAELAFQCLQGMKETRPSMEEVVERLKEIQRDGIGKTKEEEVEMETASVDHVVLLKNEVPPLSPDSNMRSTGTTPNASG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0082 639 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Acco13g0082 639 MobiDBLite consensus disorder prediction 623 639 - -
Acco13g0082 639 CDD STKc_IRAK 318 589 - -
Acco13g0082 639 Gene3D Phosphorylase Kinase; domain 1 282 388 - -
Acco13g0082 639 FunFam Wall-associated receptor kinase-like 20 389 599 - -
Acco13g0082 639 SUPERFAMILY Protein kinase-like (PK-like) 293 586 IPR011009 -
Acco13g0082 639 Pfam Wall-associated receptor kinase C-terminal 136 217 IPR032872 -
Acco13g0082 639 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Acco13g0082 639 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 636 IPR044652 GO:0004672
Acco13g0082 639 Pfam Protein kinase domain 314 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0082 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Acco13g0082 639 ProSiteProfiles Protein kinase domain profile. 312 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0082 639 SMART serkin_6 312 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0082 639 Gene3D Transferase(Phosphotransferase) domain 1 389 613 - -
Acco13g0082 639 MobiDBLite consensus disorder prediction 616 639 - -
Acco13g0082 639 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 286 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0082 Acco-ChrAcco13 671645 677600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0082 44 639 Receptor kinase-like Gene Family AT1G25390 44.057 5.30e-148 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco13g0082 Pkinase 5.9e-49 CL0016