Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0076 ATGAGTTTTGTGTTTAGATTATGCCCCTGTTTGAACAAGAGGTTCAAGGCCAACGCAGCCTCTGATTCCAATAATCCTCAAACAGCCAACGATGTTGCCGACACGTTTGATCTCTTCTTCGACCTCCACTCTCTGCAGCTAGCCACCAACTTCTTCTCCGAGTTGAATCAATTAGGTCATGGAGGGTTTGGTCCAGTTTACAAGGGTTTGATGCCAAATGGTCAAGAAGTAGCTGTGAAGAAGCTGTCTGTGGAATCAAGACAAGGAAATAGAGAATTTACCAATGAGGTCAAAGTACTTCTGAGAATTCAGCACAAGAACCTGGTTACATTATTTGGGTGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTCGATAAAAGAAAGTCACCATCTCTAGACTGGGCGACACGATTTAAAATAGTCACAGGTGTGGCAAGAGGACTTCTATACCTGCATGAAGAGGCCCCGATAAGAATCATTCATAGAGACATCAAAGCCAGTAACGTTTTGCTGGACGAGAAGTTAAACGCAAAAATTTCTGACTTTGGCCTGGCAAGACTATTTCCTGCGGATGACACTCATATGCAGACATTTAAGATTTCTGGTACACATGGTTATATGGCTCCAGAATATGCAATGCGTGGATATTTGTCTGTGAAGACAGATGTTTTCAGTTATGGAATATTGTTATTAGAAATTGTTAGTGGGAGGAAAAATCATGACCGGCTACTTGGAGAGGAGGAGGCAGATCTGTTGAACCATGCATGGAAGCTATATCAGGCAGGGAAGATAATGGATTTGATTGACACAAGCCTAGCCAAATACAATGGTGACGAGGCAGCAATGTGCATTCAGCTGGGCTTGTTGTGCTGCCAAGCAAGCATATCAGATAGACCTGATATGAATGCCGTTCATCTGATGCTCTCGAGTGATTCCTTTACTTTGCCCAGGCCCAGTAAACCTGGAATTCAAGGCCGTGTGGGGCGTTGGACTACGACCTCGTCCTCTGCTTTCACACATACTAATGCTACTAGTGGAACCAAGGCTTCTGTGGGAAGCAGTATCGTAGAGGAATATTCTAGAAATTCTATCTCCACTTCTTCCTTTGATGAAGGAAGGTGA 1164 0.4347 MSFVFRLCPCLNKRFKANAASDSNNPQTANDVADTFDLFFDLHSLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEVAVKKLSVESRQGNREFTNEVKVLLRIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSPSLDWATRFKIVTGVARGLLYLHEEAPIRIIHRDIKASNVLLDEKLNAKISDFGLARLFPADDTHMQTFKISGTHGYMAPEYAMRGYLSVKTDVFSYGILLLEIVSGRKNHDRLLGEEEADLLNHAWKLYQAGKIMDLIDTSLAKYNGDEAAMCIQLGLLCCQASISDRPDMNAVHLMLSSDSFTLPRPSKPGIQGRVGRWTTTSSSAFTHTNATSGTKASVGSSIVEEYSRNSISTSSFDEGR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0076 387 SUPERFAMILY Protein kinase-like (PK-like) 35 322 IPR011009 -
Acco13g0076 387 CDD STKc_IRAK 58 322 - -
Acco13g0076 387 FunFam Cysteine-rich receptor-like protein kinase 41 128 328 - -
Acco13g0076 387 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 356 - -
Acco13g0076 387 SMART serkin_6 52 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0076 387 ProSiteProfiles Protein kinase domain profile. 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0076 387 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Acco13g0076 387 FunFam Cysteine-rich receptor-like protein kinase 2 17 127 - -
Acco13g0076 387 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672|GO:0006468
Acco13g0076 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Acco13g0076 387 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0076 Acco-ChrAcco13 636705 638786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0076 7 337 Receptor kinase-like Gene Family AT4G21410 48.837 8.29e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco13g0076 PK_Tyr_Ser-Thr 2.6e-48 CL0016