Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0074 ATGGCTGAGTTTACCAAATATTTGCAAGCCTTAAGGTCACCTTTTCATTTCTTAGATATTGATCCAAGCATGGAACTGATAAACCAATTCACAGGGATGAGTCCACGTGTCTTGGACAACTCAAATCTTAATTTTCAGAGCTTCATGCCTTTATCCTGTGACACCTCCTTAGGCTTCCCTGAGCCTCAATTTGAAGGAAAATTGGAGGAAAGTTTTCCTAGCCTTGTCCATCAGGTCAATCGCAATGCTTTACCAGTTTCTTCGCCCACCTTTCCCGAGGAAAATGAAATCCATGAAAGTAAAAAGAGGAAGCCAACAGATGTGCAAGAGGCCAGTGCTACAAATTCAACTTCTGCAGTTCTTGAGAGTGGGAGCAAAATGAAAAATTGTTCCAGAAGAAGTAAGAGAGTAAAAAACAGTGAAACAGATGTGGACAATTCAAAAGAAGTGGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACCGATAGTCACAGTATAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAAGGTGCTTACAGAACATTGTCCCAGGATGCTGCAAGACTATGGGAATGGCAATAATGTTGGACGAGATCATAAACTATGTCCAATCCTTGCAGCATCAAGTGGAGTTCCTCTCCATGAAGCTTACTGAAGCAAGCAACTTCTATGACTTCAATTCAGAGACAGGTGCTTTCGAACCACTGCAGAGAGCAATGGCAGCTGAGGCAAAAGAGCTATCCAAACATGGGAGAGAAGACTGCGTCGGAATTTCTTGTTTTCAGCCAACCTGGCCCTTCTGA 813 0.4268 MAEFTKYLQALRSPFHFLDIDPSMELINQFTGMSPRVLDNSNLNFQSFMPLSCDTSLGFPEPQFEGKLEESFPSLVHQVNRNALPVSSPTFPEENEIHESKKRKPTDVQEASATNSTSAVLESGSKMKNCSRRSKRVKNSETDVDNSKEVVHVRAKRGQATDSHSIAERVRRGKINEKLRCLQNIVPGCCKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTEASNFYDFNSETGAFEPLQRAMAAEAKELSKHGREDCVGISCFQPTWPF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0074 270 Pfam Helix-loop-helix DNA-binding domain 163 210 IPR011598 GO:0046983
Acco13g0074 270 Gene3D - 156 228 IPR036638 GO:0046983
Acco13g0074 270 MobiDBLite consensus disorder prediction 83 145 - -
Acco13g0074 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 226 IPR036638 GO:0046983
Acco13g0074 270 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 87 235 IPR024097 GO:0006355
Acco13g0074 270 MobiDBLite consensus disorder prediction 109 127 - -
Acco13g0074 270 CDD bHLH_AtBPE_like 149 233 - -
Acco13g0074 270 SMART finulus 165 215 IPR011598 GO:0046983
Acco13g0074 270 MobiDBLite consensus disorder prediction 94 108 - -
Acco13g0074 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0074 Acco-ChrAcco13 628378 629861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0074 38 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 48.800 8.39e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g0074 HLH 4.1e-05 No_clan