Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0057 ATGACAGCGCCACGTCGGACAAAAGTCACTTTTGCCCACTATGCTGATTTATTAATTGACATGTTATACCCTCTATATGATTCTATAGACCTTGATGAGATACTCCCAGAAGCAGAGCACCGTTGGTTTCGACCTCTGGAAGTCTGCGAAATACTTCGCAATTATCAGAAGTTTGACTTAACACCAATTCCGCCTACTAGACCTCCAGCTGGATCACTGTTATTGTTTGATCGAAAAGTTGTTCGCTGCTTTCGCAAAGATGGTCACCAATGGAGGAAGAGAAAAGATGGGAATACTGTGAGGGAAGCTCATGAAAGGTTAAAGGCTGGTAAAGTGGATGTTCTAACATGTTACTATGCTCATGGAGAAGATAATGAGAACTTTCAACGGCGATGTTATTGGATGCTTGATGAAAAGTTTGAGCACATTGTACTTGTTCATTACCGAGAAGTTAAAGAGGGGTACAAGGCTGCCATTTCACATTTCCCTGCAGGTCCAGTGCCTTTTGTTGGTAGCCCTTTGAGTATTTCTGCACAAGATAGTTCATCTCTTTCTTTAGCTCAAGAACCTTATGCATCAAGTGCAAATAGAGTTGATTGTTATCGAAGAGCGTTATCTTCTGAGTATGACGATATGGACTCTGCGAGAGGTCATCAAACCACGTTGCGCACTGAACCTCTCAGCAGTCAAAGTTCGCCTTTGTTTACACATGAAACTACCGGTTTTTCTCAATTGTCAAGGAGTCCATGTAATTCATGGTCATCATCTCTTCCTAGCTTTTATCCTGCATTTTTGGCACCCTCATGGCCATTAAATCAAAACTCTAGTAGAGACACAGTTAGTATACATGATAGAAATCTTCATATTGAAGGATCTGATGAAGGCTCCCTAGCTGATTTCTTTGACCACAAGCTAAGCAATGCAAGATTTGATCCAGATAGTGCTATGCGAAATGCTGTGACTAGTGGAAATAGGCTGATTAATGAAATGCACATCCAGTCAGTTGTAGGAGTTTCCAAGTCAGTAAATCAGGTACAAAAAGAGGATGATTTAAATTCAGATTGTATCCAATTTAATGATCCTTCTGATCATCCAGTTCTTGAAGCTTCAACTGTTATAGTAGACCAGCAACATAACAATGGAAGTACATATAGTTGTGAATTAGAACAATTTGAATCTGGGGGGCTGAAGAAACTTGACAGTTTTGGAAGGTGGATGGCTAAGGAAATTGGTGGAGACTGTGATGACTGTTTGATGGCTTCAGACTCTGGCAACTATTGGGATACACTTGATCCTCATAATTGCGATAAGGCAGTGTCCAGTTTACATATGCAGTTGGATGTGGATTCATTGGGTCCTTCCCTTTCTCAAGAACAACTATTTAGCATCCTTGACTTTTCTCCAGATTGGATATTTTCTGGGTCTGAAACAAAGGTTTTAATTGTGGGCACATTCCTGGGGAGTAAGAAACTTTCTACCGAGACAAAGTGGGGATGTATGTTTGGTGATATTGAGGTTTCTGCTGAAGTGTTGACAGACAATGTGATATATTGTCAGGCTCCTTTTCATTCACCTGGTCGAGTTCCGTTCTACGTTACCTGTAGTAATAGGTTAGCTTGCAGTGAGGTGAGAGAATTTGAATATCGTGAAAACCCTATTGTAGGTGCTAGAATGATGCCAGAAGATGAGGTATGCCTTCAATTGCGATTTCTTAAGTTGGTAGATCTGGAACCTGACAAAGTCTGGTTGAACTGCTCTATTTCTCAATGTGAGAAATGTAAGCTTAAAGAAACAATCTACTTGACAAGAGAAGGAAGTGGCATATGTCAAGATTCTTTGAAGATGAATGTAAGTGATCATGTGAACCATAGAGATGTCCTAGTTCAGAAACTATTGAGAGACAAGCTTTTGCAGTGGTTAGTGGTAAAGATCCATGAAGAAGGTAAAGGACCGAATGTGTTGGATAATGAAGGCCAGGGAGTGATACATTTGGCAGCTTCTCTTGGCTATGCATGGGCTATGGGTCCCGTAGTTGCTGCTGGAGTCAATCCTAACTTTAGAGATGCCCGTGGAAGAACAGGACTTCACTGGGCATCTTATTTTGGAAGAGAGGAAACTGTGATTACACTAGTCAAACTAGGTGGAGCCCCAGGTGCTGTTGAGGATCCAACATCAGCATCTCCTCAAGGACGAACTGCTGCAGATATAGCTTCAAGTAGAGGACATAAGGGCATTGCAGCATATTTGGCTGAGGCCGATCTGACAAGCCACTTATGGACTGTCAATGAGAATGAGATAGACATCATTGCCGCAAACAAAGCAGGTGACAGTGCTTTCGAGACTGCTCTAGCTGACTCGTCCAATGTCACAATGCATGAGCAACGCTTTCTAAAAGAGTCAATTGCAGTTTTGCGAAAATCAGCTCATACAGCTGCATTAATTCAAGCAACATTCAAAGCAAGATCATTCCGTCGGAGACAGTCAGTTAATTATACTGGTGATATACCTGAGATAGCACTAAACCTAGTTGCTGTCGGTTCCTTGAACAAGGTTCAGCAAATGAGTCACTTTGAAGTTCATCTGCACTCTGCTGCTTTAAAGATCCAAAAGAGATATCGGGGGTGGAAGGGAAAGAAAGAATTTTTGAAGATACGCAACCGTATTGTAAAAATTCAGGCCCATGTTAGAGGACACCAAGTTCGTAATAAGTACAAACAGGTTGTTTGGTCAGTTAGCATCGTGGAGAAGGCAATACTGCGATGGAGGCGGAGAAGACCTGGTCTGAGAGGATTCCGAGTTGAGCAGACATTTAGAATTATGGCTTCAAGTGTTGACAAAAGTGATGAATATGAATTTCTGAGTATTGGACGGAAACAGAAATATGATGATGTTAGTAAGGCTCTGGCTAGAGTTAAGTCCATGGTGTATCACCCTGAGGCACGTGATCAGTATATGAGGCTAGTCATGAAATTTGAGGATATCAAGATTGGTGACGGGGAAGCAGTAAGCAGTACTTTAATCCAGCGATAA 3030 0.4168 MTAPRRTKVTFAHYADLLIDMLYPLYDSIDLDEILPEAEHRWFRPLEVCEILRNYQKFDLTPIPPTRPPAGSLLLFDRKVVRCFRKDGHQWRKRKDGNTVREAHERLKAGKVDVLTCYYAHGEDNENFQRRCYWMLDEKFEHIVLVHYREVKEGYKAAISHFPAGPVPFVGSPLSISAQDSSSLSLAQEPYASSANRVDCYRRALSSEYDDMDSARGHQTTLRTEPLSSQSSPLFTHETTGFSQLSRSPCNSWSSSLPSFYPAFLAPSWPLNQNSSRDTVSIHDRNLHIEGSDEGSLADFFDHKLSNARFDPDSAMRNAVTSGNRLINEMHIQSVVGVSKSVNQVQKEDDLNSDCIQFNDPSDHPVLEASTVIVDQQHNNGSTYSCELEQFESGGLKKLDSFGRWMAKEIGGDCDDCLMASDSGNYWDTLDPHNCDKAVSSLHMQLDVDSLGPSLSQEQLFSILDFSPDWIFSGSETKVLIVGTFLGSKKLSTETKWGCMFGDIEVSAEVLTDNVIYCQAPFHSPGRVPFYVTCSNRLACSEVREFEYRENPIVGARMMPEDEVCLQLRFLKLVDLEPDKVWLNCSISQCEKCKLKETIYLTREGSGICQDSLKMNVSDHVNHRDVLVQKLLRDKLLQWLVVKIHEEGKGPNVLDNEGQGVIHLAASLGYAWAMGPVVAAGVNPNFRDARGRTGLHWASYFGREETVITLVKLGGAPGAVEDPTSASPQGRTAADIASSRGHKGIAAYLAEADLTSHLWTVNENEIDIIAANKAGDSAFETALADSSNVTMHEQRFLKESIAVLRKSAHTAALIQATFKARSFRRRQSVNYTGDIPEIALNLVAVGSLNKVQQMSHFEVHLHSAALKIQKRYRGWKGKKEFLKIRNRIVKIQAHVRGHQVRNKYKQVVWSVSIVEKAILRWRRRRPGLRGFRVEQTFRIMASSVDKSDEYEFLSIGRKQKYDDVSKALARVKSMVYHPEARDQYMRLVMKFEDIKIGDGEAVSSTLIQR 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0057 1009 ProSiteProfiles IQ motif profile. 861 890 IPR000048 GO:0005515
Acco13g0057 1009 Gene3D - 860 908 - -
Acco13g0057 1009 FunFam Calmodulin-binding transcription activator 2 860 908 - -
Acco13g0057 1009 ProSiteProfiles CG-1 DNA-binding domain profile. 31 157 IPR005559 GO:0003677
Acco13g0057 1009 SMART CG_1_2 34 152 IPR005559 GO:0003677
Acco13g0057 1009 FunFam Calmodulin-binding transcription activator 2 456 552 - -
Acco13g0057 1009 Pfam CG-1 domain 37 150 IPR005559 GO:0003677
Acco13g0057 1009 Gene3D Immunoglobulins 456 555 IPR013783 -
Acco13g0057 1009 SMART iq_5 860 882 IPR000048 GO:0005515
Acco13g0057 1009 SMART iq_5 883 905 IPR000048 GO:0005515
Acco13g0057 1009 ProSiteProfiles IQ motif profile. 884 912 IPR000048 GO:0005515
Acco13g0057 1009 CDD IPT 462 550 - -
Acco13g0057 1009 MobiDBLite consensus disorder prediction 212 233 - -
Acco13g0057 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 911 IPR027417 -
Acco13g0057 1009 SMART ANK_2a 729 758 IPR002110 GO:0005515
Acco13g0057 1009 SMART ANK_2a 690 719 IPR002110 GO:0005515
Acco13g0057 1009 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 30 991 - -
Acco13g0057 1009 SUPERFAMILY E set domains 463 549 IPR014756 -
Acco13g0057 1009 Gene3D - 623 807 IPR036770 -
Acco13g0057 1009 SUPERFAMILY Ankyrin repeat 641 753 IPR036770 -
Acco13g0057 1009 Pfam IPT/TIG domain 463 548 IPR002909 -
Acco13g0057 1009 Pfam IQ calmodulin-binding motif 887 905 IPR000048 GO:0005515
Acco13g0057 1009 Pfam IQ calmodulin-binding motif 862 881 IPR000048 GO:0005515
Acco13g0057 1009 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0057 Acco-ChrAcco13 432567 441729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0057 75 995 CAMTA Transcription Factor Family AT2G22300 37.263 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Acco13g0057 CG-1 1e-47 No_clan