Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0053 ATGGATAGTATCGAAAGTGGTAGGGGCGGAGACAGAGGAATAAATAAAGAAGAAGAAGAATTAGGAGTTATAGAGGGACATCAGTTGAAGATCATCCTTGTTCGTAACGAAGCTGGGGCAGGTCTTTTCCACAATCAATTGAGGATCATGGGCTTCTTCAGCTGTTGCAAAAAAGGTGATGATCATCAGACTTCTGATACTGGACCCTTCGTGCCAAAGCCAAGCCATCCCACTGTTATATTACGCGACGCAGGGATCAGTGGTTATACTGGTAGACAATTTTCAATTTCCATTCCTCAAAGCGTTGACGTTCAGCCCATTGCGGCCCCTCCCATTTCAGTTGATGAAATGAAGTCTCTGACTGATAATTTTGGCACAAAATCTTTCATTGGTGAGGGGGCTTACGGTAAGGTGTATCATGGTGTATTGAAAAATGGGCGTCATGTGGCGATTAAGAAGTTAGATTCCAGTAGGCAACCAGAACATGAATTCCTTGCTCAGGTCTCGATAGTTTCAAGGCTGAAGCATGAAAATTTTGTCGAGCTTCTTGGTTATTGTGTTAATGGCGCTTTTCGAGCCCTGGGCTACGAGTATGCTCCTAAAGGAACTCTCCATGATATTCTACACGGACGAAAAGGTGTGAAGGGTGCACAACCAGGTCCAACATTGTCATGGGCGCAAAGAGTTAAAATTGCAGTGGGGGCAGCTAGAGGGCTTGAATATCTGCACGAAAAAGCAGAGACTCGTATAGTCTACCGTTATATCAAGTCTTGCAACATACTACTTTTCGAAGATGATGTGGCAAAGATTTCTGATTTTGATTTGTCAAATCAAGCCCCTGATACTTCTGCTCGTCTCCATTCCACCCGTGTTCTTGGAACCTTCGGTTATCATGCTCCTGAGTATGCCTTGACGGGTCAGCTCACCTCGAAGAGTGATGTCTACAGTTTTGGAGTGGTACTTCTAGAACTCTTAACAGGACGCAAACCTGTTGATCATACACTGCCGCGAGGGCAGCAGAGCCTTGTCACCTGGGCAACGCCAAAACTGAGTGAAGACAAGGTGAAGCAGTGCGTGGATGTGAAATTAACAGGAGAATACCCTCCCAAGGCAGTTGCAAAGATGGCTGCTGTAGCTGCACTGTGTGTGCAATATGAAGCGGAGTTTCGGCCAAATATGACCATTGTAGTGAAAGCTCTACAGCCTTTGCTTAATCCTCGCCTTTCCTTTAACGCAAGGCAACATCCCGACTTGTAA 1257 0.4558 MDSIESGRGGDRGINKEEEELGVIEGHQLKIILVRNEAGAGLFHNQLRIMGFFSCCKKGDDHQTSDTGPFVPKPSHPTVILRDAGISGYTGRQFSISIPQSVDVQPIAAPPISVDEMKSLTDNFGTKSFIGEGAYGKVYHGVLKNGRHVAIKKLDSSRQPEHEFLAQVSIVSRLKHENFVELLGYCVNGAFRALGYEYAPKGTLHDILHGRKGVKGAQPGPTLSWAQRVKIAVGAARGLEYLHEKAETRIVYRYIKSCNILLFEDDVAKISDFDLSNQAPDTSARLHSTRVLGTFGYHAPEYALTGQLTSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVKLTGEYPPKAVAKMAAVAALCVQYEAEFRPNMTIVVKALQPLLNPRLSFNARQHPDL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0053 418 FunFam pto-interacting protein 1 200 411 - -
Acco13g0053 418 ProSiteProfiles Protein kinase domain profile. 124 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0053 418 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Acco13g0053 418 Gene3D Phosphorylase Kinase; domain 1 93 198 - -
Acco13g0053 418 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 78 406 - -
Acco13g0053 418 Pfam Protein tyrosine and serine/threonine kinase 128 400 IPR001245 GO:0004672|GO:0006468
Acco13g0053 418 Gene3D Transferase(Phosphotransferase) domain 1 200 413 - -
Acco13g0053 418 SUPERFAMILY Protein kinase-like (PK-like) 106 400 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0053 Acco-ChrAcco13 413511 416149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0053 103 409 Receptor kinase-like Gene Family AT3G58690 46.926 2.02e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Acco13g0053 PK_Tyr_Ser-Thr 2.1e-44 CL0016