Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0052 ATGGCGTCGGATCTGAATTCAGGACTGTCCAAGAAAACATTTGTTTTTGGCTTGAAATTGTGGGTATTGATGGGGATAACAGTTGGTTTGTTCATTGTGATAATTCTTGTGGTGTTAATATGTCTTACCTCACGAAAGAGATCCAAAAGTGCCAATGACGAGGCTCCCTTCAGCCATATGTTATCAATTTTGGAAGATATCAAAGACATTAGAGTTGATCAAGTTTCAACTAACGACCATTTGCAGAATGGTGCTTTTATGAGTCTGAATGATAAATTTAGTGGCAGGGATTCTGAGAAGGTTTTGATCCAAACAAAAAATGGGGATACTAGCAGTCAATCAAGTTCATTTAATCATATGGAGAAAGATGCTGCTGGTTCTCAATATGGTGGGGAAAACGGCGCCATGACCATTTCTGCATACAAGTCATCTTTGCATCCTATAACTGCGCCATCACCATTGTGCGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGGTACTGGTTTACATTAAGGGACTTAGAACTTGCAACAAACAGGTTTTCAAGAGACAATGTTATTGGTGAAGGTGGGTATGGAGTTGTTTATCGTGGTCAGCTGCTTAATGGGACTCCAGTGGCTGTTAAGAAGCTACTCAATAATTTAGGACAAGCTGAAAAGGAATTTAGAGTGGAGGTTGAGGCTATTGGTCATGTGCGCCATAAAAACTTGGTTCGACTTTTGGGTTATTGCATTGAAGGGACTCACAGGTTGCTGGTTTATGAATACGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAATATGGGTATCTGACTTGGGATGCACGAATTAAAGTTCTGCTTGGCACTGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAACCTAAAGTGGTACATCGGGACATTAAGTCGAGCAATATTCTGATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTCGCTAAGTTGCTTGGCGCTGGTAAAAGTCATGTTACAACTAGGGTAATGGGTACTTTTGGATATGTGGCTCCGGAATATGCCATTTCTGGCTTCCTAAACGAGAAGAGTGATGTCTATAGCTTTGGGGTATTGCTTCTGGAAACAATTACTGGTAGGGATCCAGTGGATTATGGTCGACCAGCAGTTGAGGTAAATTTGGTAGATTGGCTAAAGATGATGGTAGGGAATAGGCGTTCAGAAGAGGTAGTGGACCCCAACATTGAGACTAGGCCATCAACAACTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTATTGATTCCGATGCTGAGAAAAGACCAAAGATGAGTCAAGTTGCCCGTTTGCTTGAATCGGAGGAATATCCCATACCAAGAGAGGATCGCCGCCGAAAAAGTCAGGCAGGAAACTCAGAGGGGCAGAGCCAGAGGGATACTTCTGACACAGAAAAAGTGACATTCCAGACTATAGGTCCAATGGCAGAATGA 1494 0.4311 MASDLNSGLSKKTFVFGLKLWVLMGITVGLFIVIILVVLICLTSRKRSKSANDEAPFSHMLSILEDIKDIRVDQVSTNDHLQNGAFMSLNDKFSGRDSEKVLIQTKNGDTSSQSSSFNHMEKDAAGSQYGGENGAMTISAYKSSLHPITAPSPLCGLPEFSHLGWGYWFTLRDLELATNRFSRDNVIGEGGYGVVYRGQLLNGTPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARIKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYAISGFLNEKSDVYSFGVLLLETITGRDPVDYGRPAVEVNLVDWLKMMVGNRRSEEVVDPNIETRPSTTALKRALLTALRCIDSDAEKRPKMSQVARLLESEEYPIPREDRRRKSQAGNSEGQSQRDTSDTEKVTFQTIGPMAE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0052 497 MobiDBLite consensus disorder prediction 445 470 - -
Acco13g0052 497 PANTHER OS01G0323000 PROTEIN 4 479 - -
Acco13g0052 497 ProSiteProfiles Protein kinase domain profile. 181 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0052 497 FunFam Putative receptor-like serine/threonine-protein kinase 257 468 - -
Acco13g0052 497 Pfam Protein kinase domain 182 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0052 497 Gene3D Phosphorylase Kinase; domain 1 164 256 - -
Acco13g0052 497 MobiDBLite consensus disorder prediction 471 489 - -
Acco13g0052 497 CDD STKc_IRAK 187 453 - -
Acco13g0052 497 SUPERFAMILY Protein kinase-like (PK-like) 165 454 IPR011009 -
Acco13g0052 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Acco13g0052 497 SMART serkin_6 181 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0052 497 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Acco13g0052 497 MobiDBLite consensus disorder prediction 445 497 - -
Acco13g0052 497 FunFam Putative receptor-like protein kinase 163 256 - -
Acco13g0052 497 Gene3D Transferase(Phosphotransferase) domain 1 257 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0052 Acco-ChrAcco13 408875 411385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0052 17 489 Trihelix Transcription Factor Family AT1G70460 39.293 9.14e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco13g0052 Pkinase 1.2e-46 CL0016