Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0035 ATGGGGTTCTGTGTTGAGGAGTCCATCTCAGGTTTGACATTAGGCCAAGCAATATTTGAGGCTGCTCTAATAATTGCAGTTCTGAGATGGGTGTTCTGCTGGGTTTCCAAAGTCATCCATGATCGGAGGAGGAGCCAGGCCTCATCAGATAACTCTTGTTCTTCATCTTCAGGGGTGAGCTGCCAGATGATAAGAGACAGTACTCTGACACTTAGGACCTTTGGCGAAATGGTCGAAAGAGTGACAGAAACACAGGACACTTGTGCTGTGTGCCTAAACCAGTTAAGAATGGAGGATGAGGTTAGAGAGCTCATGAACTGTGACCATGTGTTTCACAGAGAATGCATAGACAGATGGTCGGATCATGATCATGACAACCACAACCCCACCTGCCCACTCTGCAGAGCTCCTTTGCTCACTTCCTCTGATTCAGAAACATCTGCCTGCATGCCTCCCTCTCACCCCAGCTGGCCTGTGGAGAGGCTTCTGTATCTCTTCGGGGACGATCTGCCCCTTTGCTCTTAA 525 0.4914 MGFCVEESISGLTLGQAIFEAALIIAVLRWVFCWVSKVIHDRRRSQASSDNSCSSSSGVSCQMIRDSTLTLRTFGEMVERVTETQDTCAVCLNQLRMEDEVRELMNCDHVFHRECIDRWSDHDHDNHNPTCPLCRAPLLTSSDSETSACMPPSHPSWPVERLLYLFGDDLPLCS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0035 174 Pfam Ring finger domain 86 135 IPR001841 -
Acco13g0035 174 SUPERFAMILY RING/U-box 81 141 - -
Acco13g0035 174 ProSiteProfiles Zinc finger RING-type profile. 88 135 IPR001841 -
Acco13g0035 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 142 IPR013083 -
Acco13g0035 174 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 169 - -
Acco13g0035 174 SMART ring_2 88 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0035 Acco-ChrAcco13 340915 341439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0035 1 170 C3H Transcription Factor Family AT5G20885 44.505 4.55e-40 132