Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0032 ATGGCTCTCTCCTCCACCCCCACTCTCTCTCTCTTCCTCATCTCTCTCCTCATTCTCACCCTCCCTCCTGCTTCTTCCCTCCCGCCTGAGGTCTTCCCCGCCCACTTCGTCCACTCCATCTCCCAAGTCCTCCATGCCTTACAGCCGGTAATCTCTGTCTTGTCCCGCTTCGCCGATTTCTCCGGACATTCTCGCCTCTCACATGCAATTTCCGATTGCCTCGATTTGCTCGACTCCTCTTCCGACGACCTTTCCTCCTCCGCATCTGCTTCTCAATCCCCCCATGGCAAGCATAACGGTACTGGAAACCTGAGCTCTGATCTGAGGACATGGTTGAGCGCGGCACTGGCGAACCCGGAGACATGCGTGGAGGGTTTTGAAGGCACCAACAGCATTGTGAGGGGTCTAGTATCCAGTGGGCTCGAACAGGTGAGCTCGCTGGTGCAGGAGCTGCTGGCCCAGGTACACCCTGTTTCGGACCATTCCTCCGGTAGCAACAGCCGCTTTCCTCGGTGGCTGAAACCTGGGGACCGCAAGCTCCTGCAAGCCAATGGGGTGCCGGTAGACGTGGTGGTAGCTGCGGATGGGACCGGAAATTATACAAAGGTGATGGATGCGGTGCTTGCGGCTCCTGACAATAGCGTGAAACGCTATGTCATCTACGTCAAAAGAGGCGTCTACTTCGAGAACGTGGAGATCAAAAAGAAAAAGTGGAACCTCATGATGATTGGGGACGGCATGGATGCCACCATCATCTCCGGCAACCGTAGTTACGTCGATGGTTGGACCACCTTCCGCACTGCTACCTTTGCGGTCAGCGGAAGAGGGTTCATAGCACGAGACATGGCGTTCCAGAACACGGCAGGCCCCGAGAAGCACCAGGCAGTGGCCCTCAGATCCGACTCCGACCTCTCTGTCTACTACAGATGTGGCATTCACGGATACCAAGACAGCCTCTACACCCACACCATGCGCCAATTCTACAGGGAGTGCAAGATCTCCGGCACCGTCGATTTCATCTTCGGGGATGCCACTGCCGTCTTCCAAAACTGCCAGCTGGTGGCAAGGAAGGGCCTGCCAAATCAAAAGAACACCATTACGGCTCAGGGGCGCAAAGACCCCAACGAGCCCACGGGTTTCTCGTTCCAGTTCTGCAACGTGTCCGCGGATTCGGACCTGCTGCCCTCAATGAACTCCACGCAGACGTACCTGGGAAGGCCGTGGAAGAGCTACTCAAGAACGGTTTTCATGCAGTCGTACTTGAGCGAGGTGCTGAGACCGGAAGGGTGGCTGGAGTGGAACGGCGACTTCGCGTTGGACACACTGTTCTACGCCGAGTACCAGAACTCGGGCGCGGGGGCGGCGGTGGAGAAGAGGGTCAAGTGGGCAGGGTACAGAGCGCTGAATGATTCAGTGCAGGCTTCCAACTTCACGGTGTCCGCTTTTATAGAGGGCAATCTTTGGTTACCTTCCACGGGCGTCGCCTACACGGCTGGCTTAGGCGTTTGA 1509 0.5699 MALSSTPTLSLFLISLLILTLPPASSLPPEVFPAHFVHSISQVLHALQPVISVLSRFADFSGHSRLSHAISDCLDLLDSSSDDLSSSASASQSPHGKHNGTGNLSSDLRTWLSAALANPETCVEGFEGTNSIVRGLVSSGLEQVSSLVQELLAQVHPVSDHSSGSNSRFPRWLKPGDRKLLQANGVPVDVVVAADGTGNYTKVMDAVLAAPDNSVKRYVIYVKRGVYFENVEIKKKKWNLMMIGDGMDATIISGNRSYVDGWTTFRTATFAVSGRGFIARDMAFQNTAGPEKHQAVALRSDSDLSVYYRCGIHGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAVFQNCQLVARKGLPNQKNTITAQGRKDPNEPTGFSFQFCNVSADSDLLPSMNSTQTYLGRPWKSYSRTVFMQSYLSEVLRPEGWLEWNGDFALDTLFYAEYQNSGAGAAVEKRVKWAGYRALNDSVQASNFTVSAFIEGNLWLPSTGVAYTAGLGV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0032 502 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 149 IPR035513 -
Acco13g0032 502 Pfam Pectinesterase 189 486 IPR000070 GO:0030599|GO:0042545
Acco13g0032 502 SMART PMEI_2 23 154 IPR006501 GO:0004857
Acco13g0032 502 SUPERFAMILY Pectin lyase-like 186 499 IPR011050 -
Acco13g0032 502 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 158 IPR035513 -
Acco13g0032 502 Gene3D - 185 500 IPR012334 -
Acco13g0032 502 FunFam Pectinesterase 183 500 - -
Acco13g0032 502 ProSitePatterns Pectinesterase signature 2. 333 342 IPR033131 -
Acco13g0032 502 PANTHER PECTINESTERASE 36 490 - -
Acco13g0032 502 Pfam Plant invertase/pectin methylesterase inhibitor 58 139 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0032 Acco-ChrAcco13 308381 310486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0032 10 500 Carbohydrate Esterase AT3G43270 60.962 0.0 679