Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0019 ATGGCCGCTGGTCGCTCTTTTCTTCTCTTCCTCCTCACTCTCTCTTTCTCTCCCACCTGCCTCTCTAATTCTGAGGACGACGCCCTCCTCCAACTTAAAAGATCCTTCTCCCCTTCCTCCTCTCTCTCTTCTTGGGTCCCCAATTCCTCTGCTTGCTCTGCCAAGTGGGCTGGCGTCTATTGCACCAACAACCTCGTCGTCGGTTTGCACCTCTCTAACATGGCTCTCTCCGGCGACATTGACATTGATGCCCTCCTTCGTCTCCTTGCCCTTCGCAGCATTGGCTTTGTTAACAACTCCTTCTCTGGTCCCATCCCCCAATTCAATAAACTCACCACCCTAAAGGCTCTCTTCTTGACCACCAACCATTTCTCTGGACCCATTCCCTCTGATTTCTTCGCAAGCCTCACCGCCATAAAGAAAATCAGCCTGTCTGGCAATAATTTCTCTGGCAACATACCCAACTCACTGGTTCAGCTCCCATTGTTGGCAGAGTTGCGCCTCGAGGATAATGAATTCTCAGGAGCCATTCCGTCTTTAAGTCAACACTTTCGAGTGTTCAATGTTTCTAACAACCGATTGGAAGGAGCCATCCCCGACGAACTGGCCAAGTTCAACGCGACATGCTTTTCTGGAAACCCAGGGTTGTGTGGGAAAGTGGTGGGGAAGGAGTGCGAGCGGAAGGAGAAACAAAGTAGTAATTTGGTGAAGGTAGTGATGATGGCTGTGATGGGTGTGATGGTAGTGGTGTTGATAGTGGTATTGATAAAGACGGCAAGGAGACGAGAGGGCGACAAAAATGTGGGAGGGATGGGGGGTAGAAAAGATGGCGGAGGGGAAGAGATGGTGCAAGTGCATGTGCCCAGCTCCAACCATAGCAAGACTTCAGAATCAATTAGGAAAAGGTCGAATTCTGTATCGAAAAAGAATGCAACAGGGGACTTGGTGATGGTGAACGAGGAGAAGGGGGTGTTTGGGATGCCAGATTTGATGAGGGCCGCAGCCGATGTGCTAGGGAACGGGGGCATAAATTCTGCTTACAAGGCCACCATGAGAAGTGGATTGTCGGTGGTGGTAAAAAGGATGAGGGAGATAAACAAGATTAGCAGAGATTCCTTCCATGCCGAGATGAGGCGGTTTGGCAGAATCAGACACCCCAATATTCTCACCCCTTTGGCCTACCATTATCGCATGGAGGAGAAGCTCATTGTGTCTGAGTACATTCCCAAAGGTAGTCTGTTGTATGTCCTGCATGGGGATAGGGGAACATGCCATGCCGACCTCAACTGGCCCACCAGGTTAAAGATTGTCAAGGGAATCGCCAACGCCTTGAGCTTTCTGCATTCTCAGTTCGGCTCCCACGATCTACCCCACGGAAACCTCAAGTCCAGCAATGTTCTGCTCAGTGATACATATGAGCCTCTCCTCAATGACTTCGCCTTTCATCCCCTCATCAATCCAAACAATGCTCCCCAAGCACTGTTCGCCGGCAAAACTCCAGATTACACACAGTACCGGCAAGTGTCCCACAAGACCGATGTATATTGCCTCGGAATCATCATCCTGGAAATCATGACTGGGAAATTCCCTTCTCAATATCACAACAATGGCAAGGGCGGCACCGATGTTGTACAGTGGGTGTTGATGGCCATCGCCGAGGGAAGAGAAGCCGAATTGATAGACCCTGGCATTCATACTATCAACACCCACTCCCCCAATCACATGCTGCAGCTTCTCCACATCGGGGCTAGCTGCACAGAATCCAATCCACAACAGCGACTTAACTTGGGCGAAGCCATTAAAAGGATAGAGGATATTCAAGTCTAA 1827 0.5008 MAAGRSFLLFLLTLSFSPTCLSNSEDDALLQLKRSFSPSSSLSSWVPNSSACSAKWAGVYCTNNLVVGLHLSNMALSGDIDIDALLRLLALRSIGFVNNSFSGPIPQFNKLTTLKALFLTTNHFSGPIPSDFFASLTAIKKISLSGNNFSGNIPNSLVQLPLLAELRLEDNEFSGAIPSLSQHFRVFNVSNNRLEGAIPDELAKFNATCFSGNPGLCGKVVGKECERKEKQSSNLVKVVMMAVMGVMVVVLIVVLIKTARRREGDKNVGGMGGRKDGGGEEMVQVHVPSSNHSKTSESIRKRSNSVSKKNATGDLVMVNEEKGVFGMPDLMRAAADVLGNGGINSAYKATMRSGLSVVVKRMREINKISRDSFHAEMRRFGRIRHPNILTPLAYHYRMEEKLIVSEYIPKGSLLYVLHGDRGTCHADLNWPTRLKIVKGIANALSFLHSQFGSHDLPHGNLKSSNVLLSDTYEPLLNDFAFHPLINPNNAPQALFAGKTPDYTQYRQVSHKTDVYCLGIIILEIMTGKFPSQYHNNGKGGTDVVQWVLMAIAEGREAELIDPGIHTINTHSPNHMLQLLHIGASCTESNPQQRLNLGEAIKRIEDIQV 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0019 608 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Acco13g0019 608 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Acco13g0019 608 Gene3D Transferase(Phosphotransferase) domain 1 408 608 - -
Acco13g0019 608 Gene3D Ribonuclease Inhibitor 19 93 IPR032675 -
Acco13g0019 608 Gene3D Ribonuclease Inhibitor 94 234 IPR032675 -
Acco13g0019 608 SUPERFAMILY L domain-like 22 206 - -
Acco13g0019 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 607 IPR046959 -
Acco13g0019 608 FunFam Nuclear pore complex protein NUP107 22 179 - -
Acco13g0019 608 SUPERFAMILY Protein kinase-like (PK-like) 336 602 IPR011009 -
Acco13g0019 608 Gene3D Phosphorylase Kinase; domain 1 298 407 - -
Acco13g0019 608 ProSiteProfiles Protein kinase domain profile. 332 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0019 608 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0019 608 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0019 Acco-ChrAcco13 208711 210537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0019 7 608 Receptor kinase-like Gene Family AT3G42880 49.367 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco13g0019 Pkinase 1.4e-23 CL0016