Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0004 ATGCGTCCCATTGTTACGCTGCATTCAATGATGCTTGCCCCTTCCTTTTTAGGTATCGAATATTTTGAATCTCGCACTGTCGTCCTGCATCGCTCTTCATCTATGGCGGCCGCTTTCTCGACGGTGTCAAATGTCGGGTCTTTGCCGAGTCTACATAGCGGTACTCAGATCAGAGCTATGCATCCTATGAATAGTGTTGGTTCATTTAAGCTCACGGGATTTCCAACGAGATCGAATATATGCCCTTCATTGAGCGCCTTTGCCGGTTCGTTGCGTTTGGTGCCTTCCGCTTCTCGGAATTCTTCTTCCCAAGAAAGAACGCGTTTTAACAGCTCGGTTCGGGCCAGTTCCGAGGAAACACCTTTACAATCAAAAATTACTCACAAGGTGTATTTTGACATAAGTATTGGAAATCCTGTTGGGAAGCTTGCTGGAAGGATTGTGATTGGGCTCTATGGTGATGATGTGCCCCAAACAGTAGAGAATTTCCGTGCCCTTTGCACAGGAGAGAAGGGCTTCGGGTATAAAGGTTCTACATTTCATCGTGTGATAAAGGATTTCATGATTCAGGGAGGGGACTTTGACAAGGGGAATGGAACTGGAGGTAAAAGCATTTATGGCCGCACTTTCAAAGATGAGAATTTCAAGTTGTCTCATGTAGGACCAGGAGTTGTTAGCATGGCAAATGCGGGCCCCAATACCAATGGGAGCCAATTTTTTATATGCACTGTCAAGACACCCTGGCTGGATCAGAGGCATGTAGTATTTGGCCAAGTTTTGGAAGGCTTGGACATTGTTAGGTTAATTGAAACACAGGAGACAGATCGAGGTGATCGTCCGAGGAAGAAGGTGGTTATCATTGATTCTGGCGAGCTTCCAATAGCTTGA 888 0.4595 MRPIVTLHSMMLAPSFLGIEYFESRTVVLHRSSSMAAAFSTVSNVGSLPSLHSGTQIRAMHPMNSVGSFKLTGFPTRSNICPSLSAFAGSLRLVPSASRNSSSQERTRFNSSVRASSEETPLQSKITHKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGLDIVRLIETQETDRGDRPRKKVVIIDSGELPIA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0004 295 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 141 291 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 SUPERFAMILY Cyclophilin-like 122 292 IPR029000 -
Acco13g0004 295 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 223 238 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 251 266 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 192 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 238 250 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 FunFam Peptidyl-prolyl cis-trans isomerase 115 295 - -
Acco13g0004 295 Gene3D - 115 294 IPR029000 -
Acco13g0004 295 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 175 192 IPR020892 GO:0003755|GO:0006457
Acco13g0004 295 MobiDBLite consensus disorder prediction 98 120 - -
Acco13g0004 295 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 142 289 IPR002130 GO:0000413|GO:0003755
Acco13g0004 295 CDD cyclophilin_ABH_like 128 290 - -
Acco13g0004 295 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 129 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0004 Acco-ChrAcco13 47685 62180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0004 145 289 U-box Gene Family AT5G67530 49.315 1.61e-35 132