Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0003 ATGGATTTTAGTTTGATGCCATACTTCGATCGATTCAGAAGTTCTGCCAATTCATTCCTATCGCAATATGAACCAATTGTTCTGCTTCTCTCTCCTCTGCTTGCCGTCCTTCTCGCCCACACAATTCGATCGTTTTTTCATGTCGTACACGATAAAGGACTTAAACCCACTCTTCTTGGGCTACTCATCAACTCTATCAAATTGATCCCTGGTGTGATGAGTTACATCAATGCCGAAAAGCAGAAGGTTGTGGATAAGTTGCAGTCTGACAGTAAATCTAAAAGGGAAGGTTGGAGAACAGAGTTACCAAAGGCAGGACTAGGGACGGAGGTTCTTGAGAAAATGAGAGATGACAAAAGAAATGATGTCATCTGGCAAGGAAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAAGTTGACGCACACTTTTCTTTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTCGGATGTATTTCAAAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCTGCACTTCTTGGAGGTAAAGAAAAGAGTTCAGGGGGACAAATTTGTGGAAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCACGTGACTATATGAAGTCTAAAAAAGGAATTAGAAGACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAGGCTGCTCAATATTTTAACATCAAACTATGGCGCATTGCTGTTAACAAAATATTTCAAGCAGATCTGAAAGCAATTCGTCGTCATATTAACAAAAACACCATCTTGATTGTTGGTTCTGCCCCTGGATTTCCTCATGGAATAATTGACCCCATTAAAGAACTTGGTGACCTGGCTTCAAGCTTTGGAATTTGCTTTCATGTTGACCTCTGTCTTGGTGGCTTTGTTTTACCTTTTGCTCGCAAGCTTGGGTACTCCATTCCACCTTTTGACTTTTCTGTTAAAGGAGTCTCTTCAATATCAGTAGACGTGCATAAATATGGTTTAGCTCCTAAAGGAACAAGTATTGTGCTCTACAGGAACCATGACATCAGAAAGCTGATAATTGATATACTGCTATGTGGGCTTCTGGACTCAACAGCATCAATTTGTTGCTGTTTTCTTTTTCGCTTGCTGATTAATGTTGATTTTGCAGTTACTGAGTGGTCTGGTGGGTTGTATGTTTCTCCGACCATGGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGGGCTTGGGCAGCAATGATGTCCTTGGGGGAAGAAGGTTACCTGGAGAATACAAAAGCAATTATGGATGTTTCAAAGAAAATACAGGAAGGCATAGGAGAGATTCCAGAATTATTTATTGTTGGAAGACCTGACATGACAATTGTGGCCTTTGGATCTGATGTTCTGGACATATTTGAGGTCAATGATATCATGTCATCTAGAGGGTGGCATTTGAATGCATTGCAGAGGCCAAACAGCATTCATATCTGTGTGACACTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGATTTAAGGGAATCTGTGATAACCGTTAAAGAAAATCCTGGTCCAGTAAGTGGAGGGTTAGCACCTATATATGGTGCTGCAGGCAGGATGCCCGATAGAGGTATGGTACAGGAATTGCTGGTCGATTTCATGGATGGTACCTGCTAG 1704 0.4184 MDFSLMPYFDRFRSSANSFLSQYEPIVLLLSPLLAVLLAHTIRSFFHVVHDKGLKPTLLGLLINSIKLIPGVMSYINAEKQKVVDKLQSDSKSKREGWRTELPKAGLGTEVLEKMRDDKRNDVIWQGKCSGTVYIGGSEVDAHFSLINEACSMFAHTNPLHSDVFQSVVRFEAEVVAMTAALLGGKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGIRRPEMIIPESAHSAYDKAAQYFNIKLWRIAVNKIFQADLKAIRRHINKNTILIVGSAPGFPHGIIDPIKELGDLASSFGICFHVDLCLGGFVLPFARKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKLIIDILLCGLLDSTASICCCFLFRLLINVDFAVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYLENTKAIMDVSKKIQEGIGEIPELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHLAVVEDFLRDLRESVITVKENPGPVSGGLAPIYGAAGRMPDRGMVQELLVDFMDGTC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0003 567 Pfam Pyridoxal-dependent decarboxylase conserved domain 155 362 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco13g0003 567 FunFam Sphingosine-1-phosphate lyase 1 418 530 - -
Acco13g0003 567 Gene3D - 172 431 IPR015421 GO:0003824
Acco13g0003 567 SUPERFAMILY PLP-dependent transferases 76 528 IPR015424 -
Acco13g0003 567 Gene3D Aspartate Aminotransferase, domain 1 432 521 IPR015422 GO:0003824
Acco13g0003 567 FunFam sphingosine-1-phosphate lyase 1 140 431 - -
Acco13g0003 567 Gene3D - 522 566 - -
Acco13g0003 567 PANTHER - 38 567 - -
Acco13g0003 567 FunFam Sphingosine-1-phosphate lyase 1 528 566 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0003 156 527 Calmodulin-binding Proteins AT3G17760 24.619 2.39e-19 89.4