Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2144 ATGAAGCGGGCAAGGAAATCATCTAACAGGGTTTCGTGGGCTCCTGCACCCAATCTCTGTCAGGTAAAATTGTTCGTATCCGAGGATTGCCCTTCAAGGGTTGGCCAGAAATCTCAAGATCATCTTCAAGCAAAGATGTCATCAATGTTGCATTCAAGTACTATTGAATTTACTGATTTACCCCCTGGGTTTGAATGCCATCCTCTTCCAAACCAATCAAAGCATGAACTCTCTTGCATTCCTCAGATTAGTTGGAGATGCCCTCCCCCGTTTGTTTTCAGTTATAATTGGCATCTCGTAGCTGGTGAAGAAAGCATGGAAAAAGAAAATCAAAAACTTAGAGATCTCAGAGTGCTTGAAGCAGTTTACCCTCGTCTCTCTGCAATTCCTCCCAGCCCTTCCGTTGCTTTGGATGTAGAAGAGGAAGATTATGATGATAACGTCACTCCTCCTGTCCCTATCGTTCCCATTGAGGAAGATGAGTCAATGGATGACAAACTCGAATTGGCAGCAGCTAGGGAAGCTCCTGCCACTGTGCAGTCACAGAACTTGGACCAATATATGTCAGCTATCACGGCACCAATTCAATGTCATTCCTCTTCTCTTGCTTTAACCGTGACCGGAAATTCCTTACCTGGGATATCCCCTGGCTTGGAAGTAGATTTAGCAGCTGCTTCTGCTGTTGTGAGTGCCATTATGAAGATTAGTGAGCAAGGAAGCTTGATTGATATGGATCTACTCGTTAAAATATTCAATGACCCATTAATGATTGAAAAATTAGTTAATGATCGTAGAACTGCTGCTGCTGTCACAACTGCAAGGCAATCATCCAGTGCAATGGCAATACCCACTTCTGGACCGAAGCTTGCAGCGCCTTCAGTTCCACCGTCGACACCCACACATGGAGTTACACCCACAATCACTGTGGGTTTGTCATCTTCTTCAGGGTTGGAGGCTGAAATTCCGCCAATCTCATTGTCAACACCAATGCCTGGCTCTGTTCCATTGCGGGCTCCTGCACCTGTGAACAAAAGTTGCCACCATTTGTCAATTGGAGTTGTACCAACTTTAGATACCCAGCCTCCTCAGAGAGATGCTTTTCTGGCGACTGGGGCGATGCATGCGGCATCGTTGACTTCCATTCCAACCATTTTTCCCAATGGGAACTTGCAACATTCAATGACAAGTCAGGTGCGATCATTTGCTGCCAAGGAAGCTCAATCTGTTAAGGATGCCAACTATTTAAAGAATCTGATTAGGCAACACGGTTCAGATAAGAAAGAGGCGCAGGACTCACAAATAGGTATCCGGCATAGTAACTTCCAAAATTTGAAATTGGTACATGACAATAAACCTGGAGAAGTTAAAAACAAAATCCAGAAGAAAACTTGCATATACTTTAACAGCTCAAGGGGGTGTCGCAATGGTTCCAGTTGCCCCTATCAGCATGATATGTCACTTCAGTGGGGAGCTGATAACGCTTTAGGGGATCAGAATTCAAAAAGATTGAAACTAGAACCGAAATTAAGGGAATATAAATCATAA 1545 0.4414 MKRARKSSNRVSWAPAPNLCQVKLFVSEDCPSRVGQKSQDHLQAKMSSMLHSSTIEFTDLPPGFECHPLPNQSKHELSCIPQISWRCPPPFVFSYNWHLVAGEESMEKENQKLRDLRVLEAVYPRLSAIPPSPSVALDVEEEDYDDNVTPPVPIVPIEEDESMDDKLELAAAREAPATVQSQNLDQYMSAITAPIQCHSSSLALTVTGNSLPGISPGLEVDLAAASAVVSAIMKISEQGSLIDMDLLVKIFNDPLMIEKLVNDRRTAAAVTTARQSSSAMAIPTSGPKLAAPSVPPSTPTHGVTPTITVGLSSSSGLEAEIPPISLSTPMPGSVPLRAPAPVNKSCHHLSIGVVPTLDTQPPQRDAFLATGAMHAASLTSIPTIFPNGNLQHSMTSQVRSFAAKEAQSVKDANYLKNLIRQHGSDKKEAQDSQIGIRHSNFQNLKLVHDNKPGEVKNKIQKKTCIYFNSSRGCRNGSSCPYQHDMSLQWGADNALGDQNSKRLKLEPKLREYKS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2144 514 ProSiteProfiles Zinc finger C3H1-type profile. 458 486 IPR000571 GO:0046872
Acco12g2144 514 MobiDBLite consensus disorder prediction 278 300 - -
Acco12g2144 514 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2144 Acco-ChrAcco12 32972484 32977142 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco12g2144 None None None