Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2135 ATGAGACCGCTTTGTGACGCTTGTGAGAGCGACGCCGCCATCGTTTTCTGCGCCGCCGATGAGGCCGCTCTCTGCCGTGCCTGTGACGAGAAGGTTCATATGTGTAATAAGCTAGCTAGCCGGCATATAAGGGTTGGTCTGGCAAGTCCTAGTGATGTGCCTCGCTGTGACATATGTGAAAATGCACCTGCATTCTTCTATTGCGAGACGGATGGAAGTTCACTTTGTTTGCAGTGTGACATGATGGTTCATGTTGGGGGTAAAAGAACACACGGAAGATATCTTCTTTTTAGGCAGAAAGTTGAGTTTCCAGGGGATAAAACTGGTCTCCCAGAAAACTCAGCTTCACTGCCTCTGGAACACGGTGAGACTAAAAGACGACAAAATCCTCTGCCTAAAGTAAAAGTGGGAGAGAGACAACAAAATCATAGGTTGGCTCTGGCTGCAGCACCTGAACATGATGCTGACGGCCAAGCCATAATGGAAACTAACATGATTGATTTGAACATGAAGCCTCAGAGAATACATGAACAAGCTTCCAATAGTCAGCCATAA 555 0.4703 MRPLCDACESDAAIVFCAADEAALCRACDEKVHMCNKLASRHIRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMMVHVGGKRTHGRYLLFRQKVEFPGDKTGLPENSASLPLEHGETKRRQNPLPKVKVGERQQNHRLALAAAPEHDADGQAIMETNMIDLNMKPQRIHEQASNSQP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2135 184 Gene3D Classic Zinc Finger 2 91 - -
Acco12g2135 184 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Acco12g2135 184 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Acco12g2135 184 FunFam B-box zinc finger protein 19 2 92 - -
Acco12g2135 184 MobiDBLite consensus disorder prediction 107 138 - -
Acco12g2135 184 CDD Bbox1_BBX-like 56 96 - -
Acco12g2135 184 MobiDBLite consensus disorder prediction 119 138 - -
Acco12g2135 184 Pfam B-box zinc finger 3 34 IPR000315 GO:0008270
Acco12g2135 184 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
Acco12g2135 184 CDD Bbox1_BBX-like 4 47 - -
Acco12g2135 184 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 141 - -
Acco12g2135 184 SUPERFAMILY B-box zinc-binding domain 48 87 - -
Acco12g2135 184 SMART bboxneu5 51 96 IPR000315 GO:0008270
Acco12g2135 184 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2135 Acco-ChrAcco12 32895625 32897565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2135 1 183 C2C2-CO-like Transcription Factor Family AT4G38960 61.202 1.54e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Acco12g2135 zf-B_box 1.6e-07 No_clan