Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2124 ATGGCGGGTTTATTCTCACTAGGCGGCGGAGGAAGCAGTAGCAACCAGCAACAAGAACAAGGGCATCATAACCCAACCACGGAATTCCCTCCACCTGATACCCTATACTGGTACAAGAACGAGGATGTGCCGTCCTACAGAGGATTCGAGCTGTGGAACCACCAACAACAGCAACAAGATGTTTACGGTGGGGCGAGCCGGAGCAACGACGAGCCGTCGTCGTGGGGTAGTCGAGGAGGAATAAGCTGCCAGGATTGCGGGAACAAAGCGAAGAAGAATTGCCCACACATGAGGTGTAGGACTTGCTGTAAAAGCAGAGGCTTTCATTGCCAAACACACATCAACAGCACCTGGGTTCCTGCTCCTAAGCGCCGTGAGCGTCAACAATTGCATCATCCTCACTCACGCGCTCTTCCCAAAACACACAGCGAATTAGGGTTAGAGCAGCAGGATTTTCCAGCCGTACTAAACTCGCCTGCGGATTTCCGATGCGTGCGGGTGAACTCCGTTGACGACACGGACGAACAATATGCATACCAAACGGCAGTGAACATAGGAGGGCATGTGTTCAAAGGAATTTTGTACGACCAGGGTCCTGAATACAATTACACATCTGGAGATGTGAGCGCCCCCGCCGCTGGCGTAGCCGGAGTTCAACCCTTGAATTTCATTGCCAGTGCAACCAGTGGCGAGTCTGTTTTACCGGCAAGCTCAATAAGCGGCGGTGCCATGGTTTCGCCGAGTGGGGCTTTCGGAGATCCTCCTTCTTTGTATGCAAGTTCACTTAATCCCTTCATGTCTGGAGGTAGTGGTACGCAATTCTTCCCTCACTCAAGATCTTCATAA 846 0.5201 MAGLFSLGGGGSSSNQQQEQGHHNPTTEFPPPDTLYWYKNEDVPSYRGFELWNHQQQQQDVYGGASRSNDEPSSWGSRGGISCQDCGNKAKKNCPHMRCRTCCKSRGFHCQTHINSTWVPAPKRRERQQLHHPHSRALPKTHSELGLEQQDFPAVLNSPADFRCVRVNSVDDTDEQYAYQTAVNIGGHVFKGILYDQGPEYNYTSGDVSAPAAGVAGVQPLNFIASATSGESVLPASSISGGAMVSPSGAFGDPPSLYASSLNPFMSGGSGTQFFPHSRSS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2124 281 NCBIfam LRP1 C-terminal domain 152 199 IPR006511 -
Acco12g2124 281 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 263 IPR007818 GO:0003700|GO:0006355
Acco12g2124 281 MobiDBLite consensus disorder prediction 57 78 - -
Acco12g2124 281 NCBIfam putative zinc finger domain, LRP1 type 82 124 IPR006510 -
Acco12g2124 281 MobiDBLite consensus disorder prediction 8 27 - -
Acco12g2124 281 MobiDBLite consensus disorder prediction 1 35 - -
Acco12g2124 281 Pfam Domain of unknown function (DUF702) 147 200 - -
Acco12g2124 281 Pfam Domain of unknown function (DUF702) 80 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2124 Acco-ChrAcco12 32743025 32744316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2124 1 268 C2H2 Transcription Factor Family AT5G66350 39.039 1.81e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco12g2124 DUF702 9.6e-23 No_clan