Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2075 ATGTCTGACTCACCCCTGACCCCTCTCTGTTATATGATATCTCTCCTCTTTCCTCTTCTTCTCATCTTCATCATATCCTTCAGAAGAAGAAAATACCCCAGGCTTAATCTTCCTCCTGGAAGAATGGGTTGGCCTTTTATTGGTGAAACCATTGGCTATCTCAAGCCTTATTCTGCTACTACTGTTGGAGACTTCATGGAGCAGCACATAGCAAGGTATGGTAAGATTTACAAGTCCAAGTTATTTGGGGAACCAGCTATAGTGTCAGCAGATGCAGGGCTGAACAGGTACATATTACAGAACGAAGGGAAATTGTTCGAATGTAGCTATCCCAGAAGCATTGGAGGAATCCTGGGAAAATGGTCTATGTTGGTGTTGGTTGGTGACATGCATAGAGACATGAGGGCTATATCTTTGAACTTTCTCAGCCATGCCAGGCTACGAACACATCTGTTGAAAGAGGTTGAGAAGCATACCCTGCTTGTTCTTGGCTCATGGAAGGAAAATTGTACGTTCTCCGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCGGACCATATTATGAGTTTAGATCCTGGGAATCTTGAAACAGAGCTATTGAAGAAAGAGTATGTGACGTTCATGAAGGGGGTGGTTTCAGCTCCTTTAAATTTTCCCGGAACTGCGTACAGGAGGGCCTTAAAATCTCGGTCAACCATACTGAATTTCATAGAGGTGAAAATGGAAGAAAGAGTGAATAGAATGGAGGAGGAGAATGAAAATCTGGAGGAAGATGATCTTCTGAACTGGGTTCTGAAGCATTCGAATCTCTCAACAGAGCAGATTCTGGACTTGATCCTGAGCTTGCTCTTCGCTGGACATGAAACTTCATCTGTAGCTATAGCTCTTGCTATTCACTTCTTACCTGGCAGTCCTCGAGCCATACAGCAACTAAGGGAAGAACACATAAAAATAGCGAAAGCTAAGAAGGAAGCAGGAGAAGTGGAATTGACTTGGGAAGACTACAAAAGCATGGAATTTACCCACTGTGTGGTGAACGAGACACTTCGGCTGGGAAACGTTGTGAGGTTCCTTCACAGGAAGGCTCTCAAGGATGTTAGGTACAAAGGTTATGATATTCCATGTGGGTGGAAAGTCTTGCCTGTGGTTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAACAATAATGGAAGCAGTACTACTAGTATTGAAGGATCTTGCCCAAGTGGAAGCAGCAACAGTACGGCGAGCCAAATCTTCATGCCGTTCGGCGGAGGGCCGAGGCTGTGCGCCGGATCGGAATTGGCTAAAGTGGAAATGGCAGTTTTCATTCACCATCTCATCCTCAACTTTCAGTGGGACCTAGCCGATGAGACTGATCAAGCTTATGCCTACCCTTTTGTTGATTTTCCTAAAGGCCTGCCCGTCAAAGTCCAACGTCACTCTTTGATTTGA 1503 0.4498 MSDSPLTPLCYMISLLFPLLLIFIISFRRRKYPRLNLPPGRMGWPFIGETIGYLKPYSATTVGDFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRYILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRAISLNFLSHARLRTHLLKEVEKHTLLVLGSWKENCTFSAQDEAKKFTFNLMADHIMSLDPGNLETELLKKEYVTFMKGVVSAPLNFPGTAYRRALKSRSTILNFIEVKMEERVNRMEEENENLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIHFLPGSPRAIQQLREEHIKIAKAKKEAGEVELTWEDYKSMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVVAAVHLDPSLFDQPQHFNPWRWQNNNNGSSTTSIEGSCPSGSSNSTASQIFMPFGGGPRLCAGSELAKVEMAVFIHHLILNFQWDLADETDQAYAYPFVDFPKGLPVKVQRHSLI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2075 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Acco12g2075 500 Gene3D Cytochrome P450 28 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PANTHER CYTOCHROME P450 26 33 474 - -
Acco12g2075 500 PRINTS E-class P450 group IV signature 390 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS E-class P450 group IV signature 279 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS E-class P450 group IV signature 430 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS E-class P450 group IV signature 446 464 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS E-class P450 group IV signature 64 87 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 Pfam Cytochrome P450 38 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 SUPERFAMILY Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco12g2075 500 Coils Coil 237 261 - -
Acco12g2075 500 FunFam Cytochrome P450 90B1 27 496 - -
Acco12g2075 500 CDD CYP90-like 69 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2075 Acco-ChrAcco12 32388442 32392857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2075 28 421 Cytochrome P450 AT3G50660 72.771 0.0 634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2273 11 36318689 36324311 Acco12g2075 12 32388442 32392857 CCT
Acco12g2075 12 32388442 32392857 Acco12g2075 12 32388442 32392857 ECH