Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2072 ATGAAGGTGGCAGAGACAAAACTCCTCATTTGTAGGAGACCATTGAGGAATGACATGAACCGTCAAAGTATGAGGAACTCTTATCAGGCAACAAGTTTTCCTTTTCTTTCTTTTGAGAACTTGTTCATTTCTCCATACAGCCGGAATTCTCAAGATCTTCATGTTATTCTGAATCAAAAGAATATAAACAAAATGTCCTCCTCGTCCCCTGAAACTGCTCCATCTTCAGATTCTGGTAATAGTACTGATACTAATAACAACAACAATAATGATAATAATAATAATGATGGTGGAGATTCATCTCAAAGCCCTCCATCACCCCCACCACCAGACCAGCAGGCGGCATCACCCCCACCGCCGCCATCACCTGGCCAGAACTCTTCCAGTTCCAATAGTTCCGATTCTGGTTCTTCGTCGAATAACCAAGGCTCTTCTGGTAGCAAATCGCCATCTCCATCTTCAAGTCCCTTACCGGATAATAATAATGGTAATAAATCGTCGGGTTCTGGTTCATCATCATCCTCTGGATCGTCGTCATCTACAACACCTAATTTAACACCAAAATCTTCCAGCGGGAGCGACAAGCAGTCGCCTCCAGCTGCATTGTTGGGTTCCAGCGAAAATAGCAGCGGCGACAAGAATGACGATAGTAGGGCGGTCATTGGAGCCCTCGTTGGTGTAGGGTTTGTTCTTCTTATGATGCTCGCCGTCTGTATCTTTTGCTGCAGAAGGAAGAGGCGAAAGCATAGGTATTATTACAGCGACGATATCAAACCCAGCAAAACTGGAAGTAATTATTACAACAGAGGACACAACGCAAATAATTGGCGCCCTGGTGGGAATGACCATGTTGTGAGGATGCAGCAATCACCAGGCATGGGCATGGGCCCGGATAGTGGTGGGTGGGGCCCAGTTCCACCACCTCCTCCGCCACACAGCACTGATATGAGCTCCAATTACTCATCACTGGGGCCGCCCCCGCCCCCGTCTCCGTCTCCACCGTTGTCTTTAGGGCTGAATTGTGGGACCTTCTCTTTTGAAGACTTGTCTGCTGCAACGGATGGCTTTGCTGATAAGAATATGATTGGACAAGGAGGTTTTGGTTACGTGTATAAGGGTGTTTTGCCTAATGGAAAAGAAGTTGCTGTGAAGAGCCTGAAGGCTGGTAGTGGCCAAGGAGAGCGTGAGTTCCAAGCTGAGATCGAAATTATTAGTCGTGTTCATCATCGCCATCTCGTGACACTTCAGGGTTACTGTATTGCTGGTGGACAACGAATGTTAGTTTATGAATTTGTTCCCAACGACACTCTTGACCATCACCTTCATGGAAAAGGTTTGCCTACCATGGCTTGGCGTGACAGAATGAGAATTGCAGTAGGATCTGCCAAAGGGCTGGCATACCTTCATGAAGACTGTCATCCTCGAATTATCCATCGCGATATTAAGTCTTCCAACGTCCTCCTTGATGATAGCTTCGAAGCCAAGGTGGCTGATTTCGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTCTCAACTCGGGTCATGGGAACATTCGGGTACTTAGCTCCAGAATATGCGTCAAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTTGGAGTGATGTTATTAGAAATTATAACAGGGAAGCGACCTGTAGATATCCAAAATATGATGGACGATAGCTTAGTAGACTGGGCCCGACCACTCCTGGCAAGTGGGCTGGAGGATGGCAACTTTGAAGAGCTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAACTGTCACGCATGGCTGCTTGTGCTTCTGCTAGCATTCGTCATTCTGGCAAGAAACGTCCTAAAATGAGCCAGATTGTAAGAGCACTGGAAGGAGATGTGTCACTGGACGACTTGAACGAAACAAGGGCAGGGCATGGCCACCATCTGGCATCTACATCGAGCTCAGATTACGATACAACTGCGTATCAGGCTGACATGAAGAGGTTCAGGCAGATAGCTCTTGCTACCCAAGAATTTGGAAGCAGTGAATCAAGTGGTGAGATGTCTCAGAATCCAAGGCAACATCTTTAG 2088 0.466 MKVAETKLLICRRPLRNDMNRQSMRNSYQATSFPFLSFENLFISPYSRNSQDLHVILNQKNINKMSSSSPETAPSSDSGNSTDTNNNNNNDNNNNDGGDSSQSPPSPPPPDQQAASPPPPPSPGQNSSSSNSSDSGSSSNNQGSSGSKSPSPSSSPLPDNNNGNKSSGSGSSSSSGSSSSTTPNLTPKSSSGSDKQSPPAALLGSSENSSGDKNDDSRAVIGALVGVGFVLLMMLAVCIFCCRRKRRKHRYYYSDDIKPSKTGSNYYNRGHNANNWRPGGNDHVVRMQQSPGMGMGPDSGGWGPVPPPPPPHSTDMSSNYSSLGPPPPPSPSPPLSLGLNCGTFSFEDLSAATDGFADKNMIGQGGFGYVYKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVTLQGYCIAGGQRMLVYEFVPNDTLDHHLHGKGLPTMAWRDRMRIAVGSAKGLAYLHEDCHPRIIHRDIKSSNVLLDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPVDIQNMMDDSLVDWARPLLASGLEDGNFEELVDPFLEGNYNNQELSRMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNETRAGHGHHLASTSSSDYDTTAYQADMKRFRQIALATQEFGSSESSGEMSQNPRQHL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2072 695 Pfam Protein tyrosine and serine/threonine kinase 360 625 IPR001245 GO:0004672|GO:0006468
Acco12g2072 695 Gene3D Phosphorylase Kinase; domain 1 336 431 - -
Acco12g2072 695 MobiDBLite consensus disorder prediction 288 336 - -
Acco12g2072 695 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Acco12g2072 695 MobiDBLite consensus disorder prediction 102 125 - -
Acco12g2072 695 MobiDBLite consensus disorder prediction 64 215 - -
Acco12g2072 695 MobiDBLite consensus disorder prediction 262 281 - -
Acco12g2072 695 SMART serkin_6 356 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g2072 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Acco12g2072 695 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 226 672 IPR047117 -
Acco12g2072 695 SUPERFAMILY Protein kinase-like (PK-like) 329 628 IPR011009 -
Acco12g2072 695 Gene3D Transferase(Phosphotransferase) domain 1 432 642 - -
Acco12g2072 695 FunFam Proline-rich receptor-like protein kinase PERK8 330 431 - -
Acco12g2072 695 FunFam Proline-rich receptor-like protein kinase PERK1 432 639 - -
Acco12g2072 695 MobiDBLite consensus disorder prediction 64 101 - -
Acco12g2072 695 MobiDBLite consensus disorder prediction 126 210 - -
Acco12g2072 695 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2072 Acco-ChrAcco12 32322259 32326600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2072 227 688 Trihelix Transcription Factor Family AT1G70460 50.855 2.52e-151 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco12g2072 PK_Tyr_Ser-Thr 6.2e-47 CL0016