Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2044 ATGGATGCTACCAAGAAGCTTAATGAAAGGTACAAGATTGGGAAATCAGTGTACAAAGCCAGAATTGAAGGGCAGGTTGTGGCAGTCAAAAAAGTGAGGGACCAAAATGCGAAGGAGGAGTTAATCATGATGCAGAAGATGAATCATACAAATCTGGTGAAACTAAAGGGTGTCTCTTCATCAGAAAATAATGATGAAAATTACTTCCTAGTTTATGAATATGCAGAAAATGGGTCTCTTGATAATTGGCTTTATCCCAGCAGGTATTCTTCTAGCTCCATGTCCTTTCTCACTTGGAATCAGAGGATAAGCATAGCACTAGATATCGCCATGGGTCTGCAATATCTGCAAGATCACACACAACCAAGAATAGTCCATAGAAACATCACAGCAAGTAACATCCTTCTAGACTCCAAATTCAAGGCCAAGATAGCTAATTTCTCCATGGCAAGAACTTGCACCAATTTTGTGATGCTCAAAATAGACGTTTTTGCATTTGGGGTTGTTCTATTGGAGTTGCTCACAGGGAAGAAAGGAATGGAAATGAATGAAAAAGGGGAGGTGATGATGTTGTGGAAGGAATTTATGGGGATATTTGATTTTGAAGAGGGAAGAGAAGAGAGACTCAAAAAATGGATCGATCCTGAGCTGGGAAGCTTTTATCCTATTGATGATGCTCTTGGATTGGCTTCTCTTGCTCTGGCTTGCATAGTGGGTGGTAAGTCTATGTCAAGACCAACCATTGGAGAAATCGTCCTGAGCCTCTCTCTTCTCATTCAATCATCATCGCATGTTTCCTCCTTAAAGGGATCTTCCACGTTAGATTTTGACGTCGCTTCACTAAACAGTCCTATCACAGCTCGTTGA 867 0.4095 MDATKKLNERYKIGKSVYKARIEGQVVAVKKVRDQNAKEELIMMQKMNHTNLVKLKGVSSSENNDENYFLVYEYAENGSLDNWLYPSRYSSSSMSFLTWNQRISIALDIAMGLQYLQDHTQPRIVHRNITASNILLDSKFKAKIANFSMARTCTNFVMLKIDVFAFGVVLLELLTGKKGMEMNEKGEVMMLWKEFMGIFDFEEGREERLKKWIDPELGSFYPIDDALGLASLALACIVGGKSMSRPTIGEIVLSLSLLIQSSSHVSSLKGSSTLDFDVASLNSPITAR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2044 288 SUPERFAMILY Protein kinase-like (PK-like) 16 254 IPR011009 -
Acco12g2044 288 PIRSF ILK 225 271 - -
Acco12g2044 288 PIRSF ILK 2 158 - -
Acco12g2044 288 PIRSF ILK 155 198 - -
Acco12g2044 288 Pfam Protein tyrosine and serine/threonine kinase 24 153 IPR001245 GO:0004672|GO:0006468
Acco12g2044 288 Gene3D Transferase(Phosphotransferase) domain 1 76 155 - -
Acco12g2044 288 Gene3D Transferase(Phosphotransferase) domain 1 156 274 - -
Acco12g2044 288 Gene3D Phosphorylase Kinase; domain 1 3 75 - -
Acco12g2044 288 ProSiteProfiles Protein kinase domain profile. 1 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g2044 288 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2044 Acco-ChrAcco12 32019825 32020691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2044 3 262 Receptor kinase-like Gene Family AT2G33580 35.517 3.66e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco12g2044 PK_Tyr_Ser-Thr 6.2e-24 CL0016