Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2042 ATGATGAGAAAATTAAACAGTGAATATATAGAATTAATAGGGAAGTTTACCCTTCTAGCCGAGAAAGCTTTTGCGAAACTACTGGGAAAATGGACGGTAAGACGAAAGATCTCTGAAATTCGTCAACTGTGTAAGGATTGCAGTGATATGGATGTAGCGGAATTAACCTCGGAACAGGTTTTGAGGAGGGATATTCCATGGGAGACATACATGGCGACTAAGCTGATCTCAGGCACAAGCCTTCAGCTCTTGAGGCGTTATGATCATCGATCACAAAGTCAGAGAGAACAGTTGCTGGATGATGATGGTCCAGCTTATATTCGGGTATTCGTTCATGTTTTGCATGATATTTTTAAAGAGGAGACTGTAGAATATGTTTTGGCGTTGGTGGATGAAATGCTTGCAGCAAACCCAAAAAGGGCTAGATTGTTTCATGATAAGTCCCTTGCTGATGTAGACGCCTACGAACCTTTCTTAAGATTGCTCTGGAAAGCGAATTGGTTCATTCAAGAGAAAAGTTGTAAGATCCTCGCTTCAATAGTTAGTGTCCGGCCAAAAAATCAAAATGGCTTTGTTACAAATGGAGAAGCATCAAACTCAAAGAAACCCCTTACTACAATTGATGATGTTTTGACAGCATTGGTGAAATGGCTTTGTGAGCAGCTCAAAAAGCCTTCTCATCCTAGTCGTGGCGTCCCAACTGCTGTCAATTGCCTGTCAACCTTACTCAAGGAACCCATGGTTAAGTTTTCCTTTGTTAAAGCAGATGGGGTCAAGTTGCTTTTACCTTTGATTTCACCAGCATCCACTCAACAATCGATTCAGCTTCTTTATGAAACATGCCTCTGCATATGGCTTTTGTCCTATTATGAGCCTGCAATTGAATACTTGGCTACTTCAAGATCCCTTCCGCGACTTATTGATGTCATAAAGAGCTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGCCTTGACTTTTAAAAACTTGCTGTCAAGAGGAACATTGGGTGCTCAAATGGTTGACCTTCAGCTGCCACAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAGGGATAACATTAAGAAACTAAGTTCTTTTGACATGTACAAGCAAGAAGTTTTTTTGGGCAATCTGGACTGGTCTCCCATGCATAAAGATCCCATTTTTTGGCGAGAAAATATTACCAACTTCGAAGAGAATGACTTCCAGATTCTAAGAGTCCTAATAACAATTTTGGACTCGTCTGGGGATCCAAGGACTCTAGCTGTTGCTTGCTTTGACCTTTCACAGTTCATAAATTACCATTCTGCTGGGAGGGTCATCGTGACGAACCTGAAAGCCAAAGAACGAGTAATGAAATTGATGAATCATGAGAACGCCGAGGTGACTAAAAATGCCTTGTTATGCATCCAAAGGCTTTTCTTAGGTGCCAAGTTTGCAAGCTTCCTGCAGGCTTAG 1506 0.413 MMRKLNSEYIELIGKFTLLAEKAFAKLLGKWTVRRKISEIRQLCKDCSDMDVAELTSEQVLRRDIPWETYMATKLISGTSLQLLRRYDHRSQSQREQLLDDDGPAYIRVFVHVLHDIFKEETVEYVLALVDEMLAANPKRARLFHDKSLADVDAYEPFLRLLWKANWFIQEKSCKILASIVSVRPKNQNGFVTNGEASNSKKPLTTIDDVLTALVKWLCEQLKKPSHPSRGVPTAVNCLSTLLKEPMVKFSFVKADGVKLLLPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVALTFKNLLSRGTLGAQMVDLQLPQVVQNLKAQAWSDEDLLEALNYLEEGLRDNIKKLSSFDMYKQEVFLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLITILDSSGDPRTLAVACFDLSQFINYHSAGRVIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2042 501 SMART arm_5 451 491 IPR000225 GO:0005515
Acco12g2042 501 SMART arm_5 245 289 IPR000225 GO:0005515
Acco12g2042 501 SMART arm_5 290 331 IPR000225 GO:0005515
Acco12g2042 501 Gene3D - 48 380 IPR011989 -
Acco12g2042 501 FunFam V-type proton ATPase subunit H 392 493 - -
Acco12g2042 501 Gene3D - 393 493 IPR038497 -
Acco12g2042 501 PIRSF V-ATP_synth_H 41 499 IPR004908 GO:0000221|GO:0046961|GO:1902600
Acco12g2042 501 SUPERFAMILY ARM repeat 57 491 IPR016024 -
Acco12g2042 501 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 50 500 IPR004908 GO:0000221|GO:0046961|GO:1902600
Acco12g2042 501 Pfam V-ATPase subunit H 378 490 IPR011987 GO:0000221|GO:1902600
Acco12g2042 501 Pfam V-ATPase subunit H 54 372 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2042 Acco-ChrAcco12 31997730 32006005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2042 50 501 Primary Pumps ATPases(2) AT3G42050 75.442 0.0 717