Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2025 ATGCTCACTATCATAGTCTTCGCAACGAGAGTCGAAAAGTCGAACTCATGCGAACGCACTTGTGGAGGATATACCATACAGTACCCTTTTGGGTTCTCTGAAGGTTGTGAGATCAAACTAAACTGCAGTTCTAGCGATGGCATGGAAATAGGAGGATTACGAGTCAATGAAGTAACCTCTAGCAGTATCTTCATCAATGTTCCTTGGAAATGCAACCGAAGTATGCAATCAATCCGACCCCTTTTCAGCAACAACTTCGCTCCTACACGGAACAACAGCTTTATCTTGCAAGCTGGTTCATCTACGCTTGGCGGCTGTGGTGTGCCCGCTACCAGTCTAGTTGGTAATCAAACTGAGTTAGAGGATTGCAATAAAGAAGGTTATAATATCAGCTTCTTCACGGTCGTTCATAGAAAGAATAATGAATCGGATGTTGTGAGCTATGAGGATCTGAGTCGAAACCAGTGCAAGTTCTGGTTCTCTGCAATTGCTTTTGACCCGGAGGTTTCGGGCCAGTTTCAGATGCTTGAATTAGGGTGGTGGCTTGAATACCCGTGCCCTTGCCACCGTGATGCAAAGTGTAACAAGGTCCATCTCGCCGACGGCAAGCTCGGCTTCCGGTGCCACTGCCCTGATAATTTGATTGGAGATGGCTACCAAAACGGCACCGGTTGTCTCATGTGTCCTACAAATGACTGCTATCGCGAGCGCATTACATCCAAACTTGAGAAAGTTGGTGGAGGGATTTCGGTTGCACTTTTTGTGGGACTTCTTGCGTATCTTCTATATGGCAACCTGCGGCATTCTAGAAAGAGAGAGAGAAAGCAAGCAGAGCAGCTTTTACGTGAAGTTTTAGGTAATTCTAGTCTTGTAGTCTACCCGTACAACGAAATCGAAGCAGCCACTAATTTTTTCTCTGAAAAAAGGAAGCTGGGATCTGGGGCTTTTGGCACAGTTTATTTGGGGAAACTTCACAATCAATGGGTTGGCATAAAAAAGATAAAGAGACGAGATAATAATAACGTTGTCCATGTCATAAATGAGATCAAGCTCCTTTCTCTTGTTAGTCACCCAAATTTAGTCCGTATCTTGGGTTGCTGGATAGGAGGAACAAAGCAGATAATCGTTTTTCAATTTGTGCCCAATGGGACACTATCTCAACATTTACAAAGGCAAAGGGGTAAAGTACTTCCATGGATAACAAGGCTCACCATTGCTTCTGAAACTGCCAATGCTATAGCATATCTGCATTCTGCCATTGATCCTCCAATCTACCATAGAGACATAAAGTCCAGCAATATACTGCTGGATTTCGACTTCAAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATAACAGACATATCACACATCTCCACTGGTCCACGAGGGACACCAGGTTATGTTGACCCTTCATATGAGCACAATTTCCACCTCTCTGACAAGAGTGATGTCTATAGTTTTGGGGTGGTTTTAGTAGAGATAATAACCGCCCTGAAAGTGGTTGATTTTTCTCGACCTCAGAATGAGGTTAATTTGGCTGCACTTGCAGTTGATAGGATTGGAAGGGGTTGCGTGGAGGAGATAGTGGATCCTTTCCTGTCATCACATGAGGATGAATGGACCAACTATTCTGTTCACAAGGTGGCCGAACTCGCATTTAGATGCCTTGATTCACGAAGAGACATCAGGCCCGCTATGATGGAGGTGGCAGAGGAGTTAGAATACATCAAAAGCAGTGGATGCAATAAAATGGAGGAAACTATATGCACCACATCACCAGGGGCCTCTCATACTCATGAGAACTTAAGAACTCAGACTTTGACTGTTCCTGCAGATGGATAA 1851 0.4435 MLTIIVFATRVEKSNSCERTCGGYTIQYPFGFSEGCEIKLNCSSSDGMEIGGLRVNEVTSSSIFINVPWKCNRSMQSIRPLFSNNFAPTRNNSFILQAGSSTLGGCGVPATSLVGNQTELEDCNKEGYNISFFTVVHRKNNESDVVSYEDLSRNQCKFWFSAIAFDPEVSGQFQMLELGWWLEYPCPCHRDAKCNKVHLADGKLGFRCHCPDNLIGDGYQNGTGCLMCPTNDCYRERITSKLEKVGGGISVALFVGLLAYLLYGNLRHSRKRERKQAEQLLREVLGNSSLVVYPYNEIEAATNFFSEKRKLGSGAFGTVYLGKLHNQWVGIKKIKRRDNNNVVHVINEIKLLSLVSHPNLVRILGCWIGGTKQIIVFQFVPNGTLSQHLQRQRGKVLPWITRLTIASETANAIAYLHSAIDPPIYHRDIKSSNILLDFDFKSKVADFGLSRLGITDISHISTGPRGTPGYVDPSYEHNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPQNEVNLAALAVDRIGRGCVEEIVDPFLSSHEDEWTNYSVHKVAELAFRCLDSRRDIRPAMMEVAEELEYIKSSGCNKMEETICTTSPGASHTHENLRTQTLTVPADG 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2025 616 SUPERFAMILY Protein kinase-like (PK-like) 286 578 IPR011009 -
Acco12g2025 616 SMART serkin_6 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g2025 616 Gene3D Phosphorylase Kinase; domain 1 285 379 - -
Acco12g2025 616 Coils Coil 263 283 - -
Acco12g2025 616 Pfam Protein kinase domain 305 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g2025 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Acco12g2025 616 Gene3D Transferase(Phosphotransferase) domain 1 380 596 - -
Acco12g2025 616 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 587 IPR044652 GO:0004672
Acco12g2025 616 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g2025 616 FunFam Wall-associated receptor kinase-like 20 380 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2025 Acco-ChrAcco12 31800205 31804593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2025 17 583 Receptor kinase-like Gene Family AT2G23450 50.172 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g2025 Pkinase 1.6e-39 CL0016