Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2000 ATGCCAAAATCAAGTGGAATTAGGGAAATTGTTCCAGGTACTATTTTTACTGTTCTTATGGGAGCATTTTATCGATCATCTTATCTTCATTAATCAAATGAAATAGAAACGTTTCCTCTTTCCCGTTTCCCACAAAAAGAAAATGTTTGTGACAGAGCCGACCCTTGTAGAAAGAAAGTGGGTTCACGTGCATTCCTAATCTCCACCATTATCTCTCCCTCTCGTTTTCACTCTCTCTTTCATTTCATCCATAATCATACCATGGAACCTCCTCCAACACAGTCTATTGAAGTTTCCAGCAAAAGCTTCGAAGCTGGGAATGATGATCCACAAGACCAGGCCATCAATGAGTGTTTTCTGTTTTCTGTTTTATTTTTATTTTCTGGAGATGCAGTTGTTCTTGCTGCTATGATTGCGCAGGAGGCTGCCTCGATTACTTGTTCTGTAACTTCTGTTGAACTCTTCAATGGTATTGTTATGGATTTATGGCACGAGAGCGAGAAAACAGGGCTAGGGATGCCTCCCTTTGTAATTGTTGCCTCACTTGTAATCCAGTTATTATACAAAACCCTCTCTTGGATTTCACTCATGGAGTGTGCCACTAACAAGCATTACCTTCTTTTCTTGTTCTGTCTAATGTTCTTTAGTCCTCTTGTCCTCTGTCAACTTAATTACAGGTGCTATGATGCTACTTGTCCAAACCTAAGCGGTATCGTTCGATCCAATGTCTGGTCAGCAATTTTCAATGAAACCAGAATGGCAGCTTCTCTCTTGCGTCTTCACTTCCATGATTGTTTCGTCAACGGGTGTGATGGGTCTGTGCTCCTTGATGATACCAACACGTTCAGGGGTGAAAAAAGTGCAATTCCTAATAAAAATTCAGCAAGAGGATTTGAAGTAATTGACACAATTAAGTCTGCTTTAGAGAAGGCATGCCCATCCACTGTGTCATGTGCTGATATACTTACTCTAGCTGCAAGAGAAGCTGTATATATTAGTGGAGGTCCATTTTGGCCTGTACCTCTTGGTCGTAGAGATGGCAGAACAGCAAATGAGACTGAGGCTAATAATCTGCCGTCACCTTTTGAGCCCCTTCAAGACATCATTGACAAGTTCATCAATAAGGGACTTGATATTAATGATGTAGTTACTCTCTCAGGAGCACACACGTTTGGTTTTGCACAGTGCTTTACATTCAAGCCAAGGTTGTTCAACTTTGGAGGCAGTGCAGGCAAATCTGATCCAACAATGGACACTTCACTTGTTCAATCTCTGCAGAAACTATGCCCTGACCAGGATGATTCAGACGCCAAGTTGGCTCCTTTGGATCCAGCGACCACCAACAGATTCGATAACATGTACTACAGAAACCTTGTGAGCAACTCAGGATTGCTTGAGTCAGATCAGGCTCTTATGAGTGACAACAGAACTGCTTCTTTAGTGCTCAATTATAGTAAATACCCTTTTCTGTTCTTGAGGGACTTTGCTATATCCATCGAGAAGATGGGACGCATAGGTGTGCTCACTGGACAAGAAGGTGAGATCAGGAAGAACTGTAGGGTGCTGAACTAA 1572 0.4198 MPKSSGIREIVPGTIFTVLMGAFYRSSYLHXSNEIETFPLSRFPQKENVCDRADPCRKKVGSRAFLISTIISPSRFHSLFHFIHNHTMEPPPTQSIEVSSKSFEAGNDDPQDQAINECFLFSVLFLFSGDAVVLAAMIAQEAASITCSVTSVELFNGIVMDLWHESEKTGLGMPPFVIVASLVIQLLYKTLSWISLMECATNKHYLLFLFCLMFFSPLVLCQLNYRCYDATCPNLSGIVRSNVWSAIFNETRMAASLLRLHFHDCFVNGCDGSVLLDDTNTFRGEKSAIPNKNSARGFEVIDTIKSALEKACPSTVSCADILTLAAREAVYISGGPFWPVPLGRRDGRTANETEANNLPSPFEPLQDIIDKFINKGLDINDVVTLSGAHTFGFAQCFTFKPRLFNFGGSAGKSDPTMDTSLVQSLQKLCPDQDDSDAKLAPLDPATTNRFDNMYYRNLVSNSGLLESDQALMSDNRTASLVLNYSKYPFLFLRDFAISIEKMGRIGVLTGQEGEIRKNCRVLN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2000 523 SUPERFAMILY Heme-dependent peroxidases 222 523 IPR010255 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 CDD secretory_peroxidase 222 521 IPR033905 GO:0004601|GO:0042744
Acco12g2000 523 ProSiteProfiles Plant heme peroxidase family profile. 222 523 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 497 510 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 380 392 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 232 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 441 456 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 457 474 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 315 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 334 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 256 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 ProSitePatterns Peroxidases proximal heme-ligand signature. 381 391 IPR019793 -
Acco12g2000 523 PRINTS Haem peroxidase superfamily signature 254 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Haem peroxidase superfamily signature 316 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Haem peroxidase superfamily signature 443 458 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Haem peroxidase superfamily signature 334 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 PRINTS Haem peroxidase superfamily signature 381 396 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 FunFam Peroxidase 359 502 - -
Acco12g2000 523 Pfam Peroxidase 239 485 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 Gene3D - 228 523 - -
Acco12g2000 523 ProSitePatterns Peroxidases active site signature. 254 265 IPR019794 GO:0004601
Acco12g2000 523 PANTHER PEROXIDASE 72-RELATED 220 521 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco12g2000 523 FunFam Peroxidase 226 368 - -
Acco12g2000 523 Gene3D Peroxidase, domain 2 359 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2000 Acco-ChrAcco12 31585270 31592157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2000 222 519 Peroxidase AT1G49570 62.458 1.21e-132 387