Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1950 ATGTCTGTAGCTGCAGACGAAGGACAATTTCTGAACATGTTGGTGAAACTCATAAATGCGAAGAACACACTTGAAATTGATGTCTTCACTGGTTACTCTTTACTCGCCACAGCCCTTGCCCTTCCACAAGATGGAAAGGAGAAGAACAAGGGAGCGTTTGATTTCATATTTGTGGATGCGGATAAGGAGAATTACTTGAACTACCACAAGAGGGCCATTGAGTTGGTGAAGGTTGGGGGAGTTATCGCCTACGACAACACCCTGTGGAATGGCTCTGTTGCGGACCCACCAGAAGTACCTCAATTGGACCGCATCAAGCATTCTCGTGGTTTTGTGCAGGAGCTCAACAAGGCCTTGGCACTTGATTCTAGGATTGAGATTTGTCAGCTTTCTATAGCTGATGGCATTACCCTGTGCCGCCGCATCATCTGA 432 0.4699 MSVAADEGQFLNMLVKLINAKNTLEIDVFTGYSLLATALALPQDGKEKNKGAFDFIFVDADKENYLNYHKRAIELVKVGGVIAYDNTLWNGSVADPPEVPQLDRIKHSRGFVQELNKALALDSRIEICQLSIADGITLCRRII 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1950 143 Gene3D Vaccinia Virus protein VP39 1 46 IPR029063 -
Acco12g1950 143 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 141 IPR029063 -
Acco12g1950 143 PANTHER O-METHYLTRANSFERASE-RELATED 1 46 - -
Acco12g1950 143 Pfam O-methyltransferase 47 142 IPR002935 GO:0008171
Acco12g1950 143 Pfam O-methyltransferase 1 46 IPR002935 GO:0008171
Acco12g1950 143 Gene3D Vaccinia Virus protein VP39 47 142 IPR029063 -
Acco12g1950 143 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 142 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1950 Acco-ChrAcco12 30967726 30968624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1950 1 142 Monolignol Biosynthesis Gene Families AT4G34050 55.376 1.52e-68 207