Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1943 ATGGAAGCTGAACAAGCGGCTTTAGGCGCCAAGAAGAAAGGGGTCGAAGGAGAGAGAAGATACAAAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTCGCTGAAATCAGAGAACCTAATAAACGTTCTCGGATTTGGCTCGGATCCTATTCTACACCCGTCGCTGCTGCCAGAGCCTACGACACCGCCGTTTTCTATCTCAGAGGACCTTCCGCTCGCCTTAATTTTCCAGACCTCCTTGCCGGAGAAGGCTGCTTGGCCGCCGCCGCAGGTGACTTATCCGCGGCTTCGATTCGTAAGAAAGCCGTCGAAGTTGGGGCTAGGGTGGATGCCCTTCACTCGGATCACAACCATCATCATCACCACCACGCGTCGGCGGAGGCATCGGAGCTCATGCCTCGCGGCGCCGGAGCGAGCGTGGTTGACCTGAACAAGATTCCGGAACCGGAGAATCCGGAGTGCAACTGA 468 0.5641 MEAEQAALGAKKKGVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLAGEGCLAAAAGDLSAASIRKKAVEVGARVDALHSDHNHHHHHHASAEASELMPRGAGASVVDLNKIPEPENPECN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1943 155 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Acco12g1943 155 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Acco12g1943 155 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 7 152 - -
Acco12g1943 155 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Acco12g1943 155 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Acco12g1943 155 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Acco12g1943 155 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Acco12g1943 155 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Acco12g1943 155 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Acco12g1943 155 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1943 Acco-ChrAcco12 30870525 30870992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1943 21 153 AP2-EREBP Transcription Factor Family AT2G23340 64.748 5.19e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1943 AP2 9.5e-12 CL0081