Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1937 ATGAAAGAGAATGGGCCTCACAGAAAGCCGCCGTGGAGGCTTACCCACATTACAAATCTTAGTGGCCGAGTCGCGCCAAAAGCCTTCCCCACCTCCGCCTCCGCCTCCTTTCTCTCTGATTCTTCCTATTTCTTGTTTCGCTTTCGTTTGTTTTTGCAGAGAATGGAAGCTGAACAACCGGATTTAGGCGCCCAAAAGAGAGGGATCGAAGGAGAGAGAAGGTACAAAGGGATTAGGAAGAGAAAGGGGGGCAAGTGGGTCGCTGAAATCCGAGAACCCAATAAGCGTTCTCGGACTTGGCTCGGATCCTATTCTACACCCGTCGCTGCCGCCAGAGCCTATGACACCGCCAATTTCTATCACAGAGGAACTTCCGCTCGCCTTAATTTCCCGGACCTCCTTACCGGAGAAGGCTGCTTCGCCGCCGCCGCCGCCGGTGAATTGTCCTTGGCTTCGATTCGCAAGAAAGCCATCGAAGTCGGCAATAGGGTGGATGCCCTTCACTCGGATCACAAGCATCACCATCACCACCACGCGTCGGCGGAGGCATCGGAGCTCATGCCTCGCGGCGCCGGAGCGAGCGTGGTCGACCAGAACAAGATGCCGGAACCGGAGAATCCGGAGAGCAACTGA 633 0.5577 MKENGPHRKPPWRLTHITNLSGRVAPKAFPTSASASFLSDSSYFLFRFRLFLQRMEAEQPDLGAQKRGIEGERRYKGIRKRKGGKWVAEIREPNKRSRTWLGSYSTPVAAARAYDTANFYHRGTSARLNFPDLLTGEGCFAAAAAGELSLASIRKKAIEVGNRVDALHSDHKHHHHHHASAEASELMPRGAGASVVDQNKMPEPENPESN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1937 210 PRINTS Ethylene responsive element binding protein signature 113 133 IPR001471 GO:0003700|GO:0006355
Acco12g1937 210 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Acco12g1937 210 CDD AP2 74 133 IPR001471 GO:0003700|GO:0006355
Acco12g1937 210 Gene3D AP2/ERF domain 73 132 IPR036955 GO:0003700|GO:0006355
Acco12g1937 210 MobiDBLite consensus disorder prediction 168 210 - -
Acco12g1937 210 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Acco12g1937 210 FunFam Ethylene-responsive transcription factor 2 73 132 - -
Acco12g1937 210 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Acco12g1937 210 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
Acco12g1937 210 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Acco12g1937 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 65 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1937 Acco-ChrAcco12 30811611 30812243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1937 62 210 AP2-EREBP Transcription Factor Family AT2G23340 52.597 8.55e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco12g1937 AP2 1.1e-08 CL0081