Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1926 ATGGAGCCAGCATCTGCGGATTCATCATCTCAAGCTACCAACTCAGCTCCTGATATTGAGCATCATTCCACCAATGTTTCTGGACAAAATGACGATGCCCATAACTCTGCACCCTCCTTAACGGCTACTGACAAATCATCCTCAATGCTTAATCTGAAATTTTCACAGTCCTTTGGAGCAACACGAGGGAACTCGCAGGCTGGAGATACTGGGATGTCAAATTTTTCTTTCCTTACCAGTGGGTTTGGACGAATACTATCAATTCCTTCTGTTCGAAATGATACTGCTCCTGCCAACTCAGAAGCTGAGAAGCCTAATTTAATTGAATCGTTCACCAAAGGGTTAGTTAACTCTTCAAAGACTGCGGTAAAGAACATGCAAGTAACGGCGCGCCATATTGTCTCTCAAAACAAACGCAGATACCAGGATGGAGAGTTCGATTTGGATCTAGCATACATTACTGAAAATATAATCGCTATGGGATTTCCAGCTGGTGATTCCAGCTCTGGAGTTTTCGGATATATTGAGGGTTTCTATCGTAATCACATGGAAGAAGTGATTAGATTTCTCGAGACTCGTCATGAGGGAAAGTACAAAGTGTACAATCTTTGCTCTGAGAGGTTGTATGATGCTTCACTATTCAAGGGGAAGGCCGCAAGTTTCCCATTTGATGATCATAATTGCCCTCCTATCGAACTTATAGCATCCTTTTGTAGAAGTGCATATTCATGGTTAAAGGAGGATATTCAAAATGTGATAGTTGTTCATTGCAAAGCTGGCATGGGGAGGACTGGGGTGATGATTTGTAGCCTTCTTTTGTTTCTTAAGTTCTTCCCGACTGCCGAGGAGGCCATTGATTTCTTTAACCAGAAAAGATGCATTGATGGAAAAGCTCTAGTTCTTCCTAGTCAGATTAGGTATGTCAAATACTTTGAGCGGACTTTAACATACTTCAAAGGAGAAGTTCAACCTGGACGAAGGTGCATGCTAAGAGGATTTCGGCTTCTCAAGTGCCCTTACTGGATTAGGCCTTCCATTACGATTTCCGATCATAATGGAATTCTTTTCACCACAAAAAAGCATCCAAAAACAAAGGATCTGATGCCCGGAGATTTTTGGATCAGTGCTCCGAAGAAAGGAATTGTGGTATTTGCATTACCTGGGGAGCCTGGTCTAACAGAGTTGACCGGGGACTTCAAAATTCATTTTCATGATGGACAGGGAGATTTCTATTGTTGGTTAAATACAACCATGACAGAAAACAGAAAAATCTTGGACGCCTCGGATCTTGATGGTTTTGACAAGAGAAAGATCCCTGCTCCAGGATTTCAGGTCGAAGTAGTAATGGCAGACTATAACGGCACCCTACCTGCGTGGACAAAAGCCAATCCTGCCAGCAAAGGATCTAGTGGTAACACAAGCAATGTTGCAGACTCAGATGCAAGGCCTGCCTCTAATTCAAGAAAGAGTAAGGTTCGTACAAATGGGGATGATGATGTATTCTCAGATAGTGAAGGAGAGGAAACCCAAGATTCAGAGAGCAGGGAATCTAAAGCAGCATCTGATCTCAGATACGGGGAAGGTCATCAAACACCTGATGCCACTAAAGACCATGTTGGAGCCTTGACCTCAGGGACAAAGCAGCTGTCACTTCAGCATCAAGAACGCATACAAAATAATGCTTCTGAAGAAGGATCAAATAGTCCAAAAATCCAGAAAACTCCTAGGACCCCTAGAAGGGAGTACTCCGGTGAAAATGAGATCAAGGCCATTGCTGCGGATGCTTCAGTTTTTACTTTCGGAGATGATGAAGATTTTGAAAGTGACTAA 1830 0.429 MEPASADSSSQATNSAPDIEHHSTNVSGQNDDAHNSAPSLTATDKSSSMLNLKFSQSFGATRGNSQAGDTGMSNFSFLTSGFGRILSIPSVRNDTAPANSEAEKPNLIESFTKGLVNSSKTAVKNMQVTARHIVSQNKRRYQDGEFDLDLAYITENIIAMGFPAGDSSSGVFGYIEGFYRNHMEEVIRFLETRHEGKYKVYNLCSERLYDASLFKGKAASFPFDDHNCPPIELIASFCRSAYSWLKEDIQNVIVVHCKAGMGRTGVMICSLLLFLKFFPTAEEAIDFFNQKRCIDGKALVLPSQIRYVKYFERTLTYFKGEVQPGRRCMLRGFRLLKCPYWIRPSITISDHNGILFTTKKHPKTKDLMPGDFWISAPKKGIVVFALPGEPGLTELTGDFKIHFHDGQGDFYCWLNTTMTENRKILDASDLDGFDKRKIPAPGFQVEVVMADYNGTLPAWTKANPASKGSSGNTSNVADSDARPASNSRKSKVRTNGDDDVFSDSEGEETQDSESRESKAASDLRYGEGHQTPDATKDHVGALTSGTKQLSLQHQERIQNNASEEGSNSPKIQKTPRTPRREYSGENEIKAIAADASVFTFGDDEDFESD 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1926 609 Gene3D Protein tyrosine phosphatase superfamily 124 321 IPR029021 -
Acco12g1926 609 ProSitePatterns Tyrosine specific protein phosphatases active site. 255 265 IPR016130 GO:0016311|GO:0016791
Acco12g1926 609 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 253 292 IPR000387 GO:0016311|GO:0016791
Acco12g1926 609 MobiDBLite consensus disorder prediction 484 500 - -
Acco12g1926 609 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 152 319 IPR029021 -
Acco12g1926 609 Pfam Protein-tyrosine phosphatase 225 279 IPR000242 GO:0004725|GO:0006470
Acco12g1926 609 CDD PTP_PTEN 149 313 IPR045101 GO:0016791
Acco12g1926 609 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 124 321 - -
Acco12g1926 609 ProSiteProfiles C2 tensin-type domain profile. 325 452 IPR014020 -
Acco12g1926 609 MobiDBLite consensus disorder prediction 511 534 - -
Acco12g1926 609 MobiDBLite consensus disorder prediction 541 573 - -
Acco12g1926 609 MobiDBLite consensus disorder prediction 1 46 - -
Acco12g1926 609 SMART PTEN_C2_2 323 451 IPR014020 -
Acco12g1926 609 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 117 565 - -
Acco12g1926 609 MobiDBLite consensus disorder prediction 462 587 - -
Acco12g1926 609 ProSiteProfiles Phosphatase tensin-type domain profile. 139 318 IPR029023 -
Acco12g1926 609 MobiDBLite consensus disorder prediction 462 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1926 Acco-ChrAcco12 30747490 30753581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1926 27 609 Protein tyrosine phosphatase (PTP) family AT3G19420 61.269 0.0 729