Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1925 ATGGTGCAAGTTCGACTTGGAGAAGAGCATCAGGTCCGACAAGATTCATTGCGATCAGGCCTGCTGCTAGCTAGTAGCCTTTTCCTTTTCGTCTCTGCTTTATTGTTGGTTTCGTCTATCTTCTCTATAATAGCTGTAACTCTAGCGGGGTATTGTTATTTAATGCTGGTTTCAAAAGATGTAGTGTTTGTTTCTGATTGTATTCATCTATCTCACTTTGAAGAATTTACTATGGAGGGGAAGATAGACATTGCAGAGAAAAAGGTGCTGGTTGATATTGTAAAATTGGCACAAAAAAGAGGAATGAAGGGTGCGCTAGGAGACTGGAAAAACTTCTTAATTAGTCATGATAAAAAGTTTGGGGCTCATTTGAGCGATCCAGCAAAGAAGTCCCATGAGACATTGGTTGCATTTCTCAAAACCTTTTCAAAGCAGGTTGATTTAAAGTTTTTTGATACCATCTTGCGATGGCATTCTAATCGAAACCTATTTCAGCTATTCAATGATAAGTCTCATGACACCCCTGAGCAGAGGCTTGTCCAAAAAACTTTGCAGCACCCATTGTATCCATTGGATTATACATTTGGAGAACTTGATGAGGAGTGGATGGTTATAAACCTTAAGAAAAAAAACAGGTTGCTGAAGTTTACCAAGATGGTTGCTATTGATTGTGAAATGGTTCTCTGTGAGGATGGGACTGAAGCTGTAGTGAGTGTCTGTGTGGTTGACCGCAATTTGAAGGTCAATTTTAAAAAACTTGTACAACCAAACAAAGCAATTGCTGACTACAGATCAGAGATTACTGGGGTCTATCCTCAGGATCTCGAAGGCATTACTTGCTCATTGGCTAAGATACAAAAATCTTTGAGTAAGATGTTAATGGATGGAACAATATTAGTGGGACATAGTTTGCATAATGATCTACGCGCGCTGAAATTAGATTATGTTAGAGTGATTGACACTTCATATATCTTCCAATACTCAGATGGTAATCCTCATAGGAGACCATCTTTGAATACTTTATGTAAGGCCATGTTAGGTTATGAACTTCGGGAAACAGGTGCTTCACATAATTGTCTTGATGATGCAATGGCAGCGATGAAGCTTGTTCTTGCTAAGATAGAGCGAGGTGTTGATAATACAATTCCCTTGCGTCGAGAGCCTGTTCTTGAATGTGAAATGTCTAAGCTGCTTCTTCACAGGATATCATCTAGGGTTAATAGTCAAGAACTGTATAAAGTTATTCCTGGGGACTACAATTTAGAACTTAGGCCCCCTAAAGGGGAAATGTATTCTGCACTCGCCATCTTCGAGAATCCAAAAGAGGCCAATGAGGCCTTTGAAAGTCTCCAAGGTGACCAAGAAACGGATTCAGTTGGACGTTCGCAGAAACTTGTCACATTCCGGTGCAATACAGGTGTGAAAACCAGTATATGTGTTAGGAAAATGGCACCTGATCGCCCCAATGGTTCTAAGAGAGCTTTGGAAGCCGACGAACCAACAGTGTCGAAGAAAGCAAAGACGGATCCTGAAATCAACGGGATGGTGTCGAAGAAAGCTAAGATGGATCCTGAAATTGAAGGGAATGAGACAACGATCTCTAACAAGTGCGACACCCACTTGAATGAGATTGAAGCTCTAAATCAACGGCTGAAAGAAGAGATTGAATCGCTGAAGCAACAGCTGAAACAAAAGGATTTGGAAATCGACATATTAAATAAAATGGTTTCCTCCTTGAGCAAGAAAGCAAGGAAATGA 1758 0.4039 MVQVRLGEEHQVRQDSLRSGLLLASSLFLFVSALLLVSSIFSIIAVTLAGYCYLMLVSKDVVFVSDCIHLSHFEEFTMEGKIDIAEKKVLVDIVKLAQKRGMKGALGDWKNFLISHDKKFGAHLSDPAKKSHETLVAFLKTFSKQVDLKFFDTILRWHSNRNLFQLFNDKSHDTPEQRLVQKTLQHPLYPLDYTFGELDEEWMVINLKKKNRLLKFTKMVAIDCEMVLCEDGTEAVVSVCVVDRNLKVNFKKLVQPNKAIADYRSEITGVYPQDLEGITCSLAKIQKSLSKMLMDGTILVGHSLHNDLRALKLDYVRVIDTSYIFQYSDGNPHRRPSLNTLCKAMLGYELRETGASHNCLDDAMAAMKLVLAKIERGVDNTIPLRREPVLECEMSKLLLHRISSRVNSQELYKVIPGDYNLELRPPKGEMYSALAIFENPKEANEAFESLQGDQETDSVGRSQKLVTFRCNTGVKTSICVRKMAPDRPNGSKRALEADEPTVSKKAKTDPEINGMVSKKAKMDPEIEGNETTISNKCDTHLNEIEALNQRLKEEIESLKQQLKQKDLEIDILNKMVSSLSKKARK 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1925 585 Coils Coil 537 575 - -
Acco12g1925 585 CDD REX1_like 220 371 IPR034922 -
Acco12g1925 585 MobiDBLite consensus disorder prediction 486 507 - -
Acco12g1925 585 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 87 384 IPR047021 GO:0004527
Acco12g1925 585 MobiDBLite consensus disorder prediction 483 507 - -
Acco12g1925 585 FunFam Small RNA degrading nuclease 3 214 388 - -
Acco12g1925 585 Pfam Exonuclease 220 369 IPR013520 -
Acco12g1925 585 SMART exoiiiendus 218 379 IPR013520 -
Acco12g1925 585 SUPERFAMILY Ribonuclease H-like 219 374 IPR012337 -
Acco12g1925 585 Gene3D - 215 384 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1925 Acco-ChrAcco12 30741383 30747008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1925 218 369 C2H2 Transcription Factor Family AT2G48100 33.526 1.85e-13 70.1