Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1923 ATGAACACCACTTCGTTGCAGAGCTTGGCATATCTCCAGCCCAGTCCCAACACGATTATCCGTTCCTCATCGTTGGACTCCGTCACCGCTTTCACGAACCCCAACGGTTCCTGGCGCGTGGCAGCCGTTAGCTTCCCCAACTCCTCGTCGGTTTCTTTCGTTCTTCGAGGAACACAGCCTGCAACCTCACTTTCTTCTCCTTCTCCTACTGTCAACTCCTCAGAAACGAGAGCGTGTACAACAAACGCCTTCACAGTGGCTGAACACGCCCTCACAATGATACGCTTTCACATTCAAGTGGAGAAATCGAAGTTTGAATTTGAAGCAAAAGATATAAAGAGAATGGAGCTTTTAGTGTTATCAACTCTTCAATGGAGGATGAATCCTGTGACCCCAATCTCCTTCTTTGGACACATTGTGAGATCACTCCGTTTAAAGAGCCACTTGCATTGTGAATTCCTCTGGCGATGCGAACGCCTTCTGCTTTTATTGCTTCCAGATTCACATGTTATGAGTTATCTTCCTTCCATAATTGCTGCTGCTACAATGATCCATGTGATCCGAGAGATTGAACCATTTAATGTGATGGAATACAGAAACCAGCTTTTGGCTTTACTCAAAATCAGCGAGGGACAAGTGAATCGGTGCTACAAACATGTTCTGAAAATACTATGTTGTCACCAAGACATTGAAAATCTTCACAGCAGACGCAAACGCCTATGTGAACCGAGAAGCCCAGATGATGTCATTGATGCTTTCTTCAACAATGATAGTTCGAATGATTCTTGGGCCTTAAGAACAGCCTCAGTATCAGAGAAGCCAATGTTGAAGAAGAACCGATCTCAGGAACAGTCTATGGATATTATTAATAATGTCCCTCCATAA 885 0.4441 MNTTSLQSLAYLQPSPNTIIRSSSLDSVTAFTNPNGSWRVAAVSFPNSSSVSFVLRGTQPATSLSSPSPTVNSSETRACTTNAFTVAEHALTMIRFHIQVEKSKFEFEAKDIKRMELLVLSTLQWRMNPVTPISFFGHIVRSLRLKSHLHCEFLWRCERLLLLLLPDSHVMSYLPSIIAAATMIHVIREIEPFNVMEYRNQLLALLKISEGQVNRCYKHVLKILCCHQDIENLHSRRKRLCEPRSPDDVIDAFFNNDSSNDSWALRTASVSEKPMLKKNRSQEQSMDIINNVPP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1923 294 CDD CYCLIN_AtCycD-like_rpt2 130 218 - -
Acco12g1923 294 SUPERFAMILY Cyclin-like 113 229 IPR036915 -
Acco12g1923 294 Gene3D - 97 128 - -
Acco12g1923 294 MobiDBLite consensus disorder prediction 274 294 - -
Acco12g1923 294 Gene3D - 129 219 - -
Acco12g1923 294 SMART Cyclin_C_2 130 248 IPR004367 -
Acco12g1923 294 Pfam Cyclin, C-terminal domain 130 228 IPR004367 -
Acco12g1923 294 PANTHER CYCLINS 103 221 IPR039361 -
Acco12g1923 294 FunFam CYCLIN D32 129 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1923 Acco-ChrAcco12 30719068 30723858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1923 61 286 Core Cell Cycle Gene Families AT5G67260 39.224 1.82e-44 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1923 12 30719068 30723858 Acco11g2091 11 34941694 34944572 CCT
Acco11g2091 11 34941694 34944572 Acco12g1923 12 30719068 30723858 ECH
Acco05g1964 05 35986247 35987640 Acco12g1923 12 30719068 30723858 ECH
Acco12g1923 12 30719068 30723858 Acco12g1923 12 30719068 30723858 ECH